############# Start of Description of junction: j3 # Number of strands: NUM_STRANDS = 4 LILLEY = 3HS6HS2 FINGERPRINT = 60:66:108:117:125:174 LOOP_LENGTH_SUM = 8 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 237 S1_NAME_ID3 = 242 S1_NUM_ID5_ORIG = 237 S1_NUM_ID3_ORIG = 242 S1_NAME2_ID5 = 239 S1_NAME2_ID3 = 240 S1_NUM2_ID5_ORIG = 239 S1_NUM2_ID3_ORIG = 240 S1_SQ2 = UC S1_SQLEN2 = 2 S1_SQ = CGUCCC S1_SQLEN = 6 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 113 S2_NAME_ID3 = 124 S2_NUM_ID5_ORIG = 113 S2_NUM_ID3_ORIG = 124 S2_NAME2_ID5 = 115 S2_NAME2_ID3 = 122 S2_NUM2_ID5_ORIG = 115 S2_NUM2_ID3_ORIG = 122 S2_SQ2 = GAGUAACG S2_SQLEN2 = 8 S2_SQ = GUGAGUAACGCG S2_SQLEN = 12 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 284 S3_NAME_ID3 = 291 S3_NUM_ID5_ORIG = 284 S3_NUM_ID3_ORIG = 291 S3_NAME2_ID5 = 286 S3_NAME2_ID3 = 289 S3_NUM2_ID5_ORIG = 286 S3_NUM2_ID3_ORIG = 289 S3_SQ2 = GUAG S3_SQLEN2 = 4 S3_SQ = GGGUAGCC S3_SQLEN = 8 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 309 S4_NAME_ID3 = 314 S4_NUM_ID5_ORIG = 309 S4_NUM_ID3_ORIG = 314 S4_NAME2_ID5 = 311 S4_NAME2_ID3 = 312 S4_NUM2_ID5_ORIG = 311 S4_NUM2_ID3_ORIG = 312 S4_SQ2 = CC S4_SQLEN2 = 2 S4_SQ = GGCCAC S4_SQLEN = 6 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 12 H1_INID2 = 3 H1_OUTID2 = 10 H1_INID2_ORIG = 239 H1_OUTID2_ORIG = 122 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 124.66117504018194 H1_P_Y = 77.85747324085717 H1_P_Z = -17.793097656464283 # Orientation: H1_DX_X = 0.33542570428330976 H1_DX_Y = 0.37100251966795383 H1_DX_Z = 0.8659369072317453 H1_DY_X = -0.18575015693474484 H1_DY_Y = 0.9271895872964961 H1_DY_Z = -0.3252942489618711 H1_DZ_X = -0.9235726696393556 H1_DZ_Y = -0.0517358638565355 H1_DZ_Z = 0.37991699657458256 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 286 H2_OUTID2_ORIG = 240 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 143.26245281872497 H2_P_Y = 80.16593338361761 H2_P_Z = -26.142289268785948 # Orientation: H2_DX_X = 0.9022801107096541 H2_DX_Y = 0.22084556481048878 H2_DX_Z = 0.3702942590984968 H2_DY_X = 0.404595157348723 H2_DY_Y = -0.7304609585918058 H2_DY_Z = -0.5502086391752492 H2_DZ_X = 0.14897436177986378 H2_DZ_Y = 0.646261575893746 H2_DZ_Z = -0.7484334406315725 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 311 H3_OUTID2_ORIG = 289 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 135.53919820209185 H3_P_Y = 79.11260087179163 H3_P_Z = 0.5810652304585542 # Orientation: H3_DX_X = -0.42689976469199564 H3_DX_Y = 0.34583685378970586 H3_DX_Z = -0.8355557799852436 H3_DY_X = -0.8264456439913204 H3_DY_Y = 0.22585850195659418 H3_DY_Z = 0.515728159616772 H3_DZ_X = 0.3670751809012529 H3_DZ_Y = 0.9107056646660112 H3_DZ_Z = 0.1893964200072129 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 3 H4_OUTID2 = 4 H4_INID2_ORIG = 115 H4_OUTID2_ORIG = 312 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 127.93010903005523 H4_P_Y = 64.06671630474064 H4_P_Z = -1.5440414340245887 # Orientation: H4_DX_X = 0.7066403342394665 H4_DX_Y = -0.26924857733789764 H4_DX_Z = -0.6543429082885135 H4_DY_X = 0.5588069541780669 H4_DY_Y = -0.35491982872351 H4_DY_Z = 0.7495109759977479 H4_DZ_X = -0.4340440369227281 H4_DZ_Y = -0.8952860541639183 H4_DZ_Z = -0.1003426889784107 ############# END of Description of junction: j3