############# Start of Description of junction: j28 # Number of strands: NUM_STRANDS = 2 LILLEY = 2HS1 FINGERPRINT = 162 LOOP_LENGTH_SUM = 1 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1193 S1_NAME_ID3 = 1199 S1_NUM_ID5_ORIG = 1193 S1_NUM_ID3_ORIG = 1199 S1_NAME2_ID5 = 1195 S1_NAME2_ID3 = 1197 S1_NUM2_ID5_ORIG = 1195 S1_NUM2_ID3_ORIG = 1197 S1_SQ2 = CUG S1_SQLEN2 = 3 S1_SQ = GUCUGGU S1_SQLEN = 7 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 1058 S2_NAME_ID3 = 1063 S2_NUM_ID5_ORIG = 1058 S2_NUM_ID3_ORIG = 1063 S2_NAME2_ID5 = 1060 S2_NAME2_ID3 = 1061 S2_NUM2_ID5_ORIG = 1060 S2_NUM2_ID3_ORIG = 1061 S2_SQ2 = CG S2_SQLEN2 = 2 S2_SQ = GCCGUC S2_SQLEN = 6 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 1195 H1_OUTID2_ORIG = 1061 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 202.17538687405184 H1_P_Y = 130.21399791637475 H1_P_Z = 2.2858884698379454 # Orientation: H1_DX_X = 0.41049512105982444 H1_DX_Y = -0.5279050431472001 H1_DX_Z = -0.7435119508157446 H1_DY_X = -0.8949409776158177 H1_DY_Y = -0.07688432559251623 H1_DY_Z = -0.43951046297240914 H1_DZ_X = 0.17485537501065096 H1_DZ_Y = 0.8458162128370077 H1_DZ_Z = -0.5040044959441874 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 7 H2_INID2 = 3 H2_OUTID2 = 5 H2_INID2_ORIG = 1060 H2_OUTID2_ORIG = 1197 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 200.26131465926585 H2_P_Y = 117.09816408361266 H2_P_Z = 14.22430466709099 # Orientation: H2_DX_X = 0.9909356379206997 H2_DX_Y = -0.07082985040591439 H2_DX_Z = -0.11414768412086751 H2_DY_X = 0.13131276728279317 H2_DY_Y = 0.6900058879989359 H2_DY_Z = 0.7117926886919594 H2_DZ_X = 0.028346404484778986 H2_DZ_Y = -0.7203297903170949 H2_DZ_Z = 0.6930522884563075 ############# END of Description of junction: j28