############# Start of Description of junction: j28 # Number of strands: NUM_STRANDS = 3 LILLEY = 2HS3HS2 FINGERPRINT = 52:112:156 LOOP_LENGTH_SUM = 5 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1343 S1_NAME_ID3 = 1350 S1_NUM_ID5_ORIG = 1343 S1_NUM_ID3_ORIG = 1350 S1_NAME2_ID5 = 1345 S1_NAME2_ID3 = 1348 S1_NUM2_ID5_ORIG = 1345 S1_NUM2_ID3_ORIG = 1348 S1_SQ2 = UAGU S1_SQLEN2 = 4 S1_SQ = GCUAGUAA S1_SQLEN = 8 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 935 S2_NAME_ID3 = 940 S2_NUM_ID5_ORIG = 935 S2_NUM_ID3_ORIG = 940 S2_NAME2_ID5 = 937 S2_NAME2_ID3 = 938 S2_NUM2_ID5_ORIG = 937 S2_NUM2_ID3_ORIG = 938 S2_SQ2 = AA S2_SQLEN2 = 2 S2_SQ = ACAAGC S2_SQLEN = 6 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 1372 S3_NAME_ID3 = 1380 S3_NUM_ID5_ORIG = 1372 S3_NUM_ID3_ORIG = 1380 S3_NAME2_ID5 = 1374 S3_NAME2_ID3 = 1378 S3_NUM2_ID5_ORIG = 1374 S3_NUM2_ID3_ORIG = 1378 S3_SQ2 = AAUAC S3_SQLEN2 = 5 S3_SQ = UGAAUACGU S3_SQLEN = 9 S3_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 1345 H1_OUTID2_ORIG = 938 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 225.94330255705816 H1_P_Y = 123.66635085945114 H1_P_Z = -18.657726854408963 # Orientation: H1_DX_X = 0.5734339905097556 H1_DX_Y = 0.8061212619105476 H1_DX_Z = -0.14608890999594948 H1_DY_X = 0.06080530663231798 H1_DY_Y = 0.13594964564751422 H1_DY_Z = 0.9888480209484527 H1_DZ_X = 0.8169921500316946 H1_DZ_Y = -0.575922047628012 H1_DZ_Z = 0.028941697298726865 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 1374 H2_OUTID2_ORIG = 1348 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 231.46628892444298 H2_P_Y = 140.2966930471226 H2_P_Z = -3.7418722662430213 # Orientation: H2_DX_X = 0.11161579655561127 H2_DX_Y = -0.7351235226042832 H2_DX_Z = -0.6686817781823677 H2_DY_X = 0.9480458102183036 H2_DY_Y = 0.28049062014932247 H2_DY_Z = -0.15011380261583973 H2_DZ_X = 0.29791115401539514 H2_DZ_Y = -0.6171858865221509 H2_DZ_Z = 0.7282379595922475 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 9 H3_INID2 = 3 H3_OUTID2 = 7 H3_INID2_ORIG = 937 H3_OUTID2_ORIG = 1378 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 211.37234292147397 H3_P_Y = 135.6208922303443 H3_P_Z = -21.71033505167063 # Orientation: H3_DX_X = -0.16975087638505215 H3_DX_Y = -0.520835004269145 H3_DX_Z = -0.836609549487985 H3_DY_X = -0.14321706801234768 H3_DY_Y = -0.8268798274530695 H3_DY_Z = 0.5438369446636564 H3_DZ_X = -0.9750248773218289 H3_DZ_Y = 0.2121335647160265 H3_DZ_Z = 0.06577111314565443 ############# END of Description of junction: j28