#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS4HS6
FINGERPRINT = 151
LOOP_LENGTH_SUM = 10
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  19
S1_NAME_ID3 = 28
S1_NUM_ID5_ORIG =  19
S1_NUM_ID3_ORIG = 28
S1_NAME2_ID5 =  21
S1_NAME2_ID3 = 26
S1_NUM2_ID5_ORIG =  21
S1_NUM2_ID3_ORIG = 26
S1_SQ2 = GAAACA
S1_SQLEN2 = 6
S1_SQ = GAGAAACACA
S1_SQLEN = 10
S1_CHAR = C
## Properties of strand 2
S2_NAME_ID5 =  34
S2_NAME_ID3 = 45
S2_NUM_ID5_ORIG =  34
S2_NUM_ID3_ORIG = 45
S2_NAME2_ID5 =  36
S2_NAME2_ID3 = 43
S2_NUM2_ID5_ORIG =  36
S2_NUM2_ID3_ORIG = 43
S2_SQ2 = GUACAUUA
S2_SQLEN2 = 8
S2_SQ = UGGUACAUUACC
S2_SQLEN = 12
S2_CHAR = D
## Properties of helix 1
H1_INID = 1
H1_OUTID = 12
H1_INID2 = 3
H1_OUTID2 = 10
H1_INID2_ORIG = 21
H1_OUTID2_ORIG = 43
H1_INSEQ_CHAR = C
H1_OUTSEQ_CHAR = D
# Position:
H1_P_X = 21.0202622535157
H1_P_Y = 31.506336015402624
H1_P_Z = 44.131841613321534
# Orientation:
H1_DX_X = 0.12766727168773429
H1_DX_Y = 0.028626980153799053
H1_DX_Z = -0.9914038348458618
H1_DY_X = -0.9292212108210478
H1_DY_Y = -0.3460324095997436
H1_DY_Z = -0.12965150545545612
H1_DZ_X = -0.34676938893172604
H1_DZ_Y = 0.9377857257998059
H1_DZ_Z = -0.01757621648847163
## Properties of helix 2
H2_INID = 1
H2_OUTID = 10
H2_INID2 = 3
H2_OUTID2 = 8
H2_INID2_ORIG = 36
H2_OUTID2_ORIG = 26
H2_INSEQ_CHAR = D
H2_OUTSEQ_CHAR = C
# Position:
H2_P_X = 41.734485360937626
H2_P_Y = 6.7610012069890075
H2_P_Z = 41.08811787865696
# Orientation:
H2_DX_X = -0.5257991122645294
H2_DX_Y = -0.5056075424136175
H2_DX_Z = 0.684029463251612
H2_DY_X = -0.4041366423870727
H2_DY_Y = -0.5591120665781064
H2_DY_Z = -0.7239249072154266
H2_DZ_X = 0.7484710200281199
H2_DZ_Y = -0.6570804441323919
H2_DZ_Z = 0.0896460937065342
#############  END of Description of junction: j1