############# Start of Description of junction: j41 # Number of strands: NUM_STRANDS = 3 LILLEY = 2HS2HS2 FINGERPRINT = 70:104:157 LOOP_LENGTH_SUM = 4 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2239 S1_NAME_ID3 = 2246 S1_NUM_ID5_ORIG = 2239 S1_NUM_ID3_ORIG = 2246 S1_NAME2_ID5 = 2241 S1_NAME2_ID3 = 2244 S1_NUM2_ID5_ORIG = 2241 S1_NUM2_ID3_ORIG = 2244 S1_SQ2 = CUCA S1_SQLEN2 = 4 S1_SQ = CUCUCACU S1_SQLEN = 8 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 2131 S2_NAME_ID3 = 2136 S2_NUM_ID5_ORIG = 2131 S2_NUM_ID3_ORIG = 2136 S2_NAME2_ID5 = 2133 S2_NAME2_ID3 = 2134 S2_NUM2_ID5_ORIG = 2133 S2_NUM2_ID3_ORIG = 2134 S2_SQ2 = UG S2_SQLEN2 = 2 S2_SQ = GCUGAG S2_SQLEN = 6 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 2255 S3_NAME_ID3 = 2262 S3_NUM_ID5_ORIG = 2255 S3_NUM_ID3_ORIG = 2262 S3_NAME2_ID5 = 2257 S3_NAME2_ID3 = 2260 S3_NUM2_ID5_ORIG = 2257 S3_NUM2_ID3_ORIG = 2260 S3_SQ2 = GACA S3_SQLEN2 = 4 S3_SQ = AGGACACC S3_SQLEN = 8 S3_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 2241 H1_OUTID2_ORIG = 2134 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 122.29510590215263 H1_P_Y = 99.24137027048353 H1_P_Z = 34.918927835559224 # Orientation: H1_DX_X = 0.5110003759992878 H1_DX_Y = 0.30005391816048643 H1_DX_Z = -0.8055099390604212 H1_DY_X = 0.8575200799060951 H1_DY_Y = -0.1131030545823819 H1_DY_Z = 0.5018635388250132 H1_DZ_X = 0.05948048660214056 H1_DZ_Y = -0.9471934043481696 H1_DZ_Z = -0.3150979632953863 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 2257 H2_OUTID2_ORIG = 2244 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 120.31635094453497 H2_P_Y = 123.6847689663018 H2_P_Z = 33.883288417768064 # Orientation: H2_DX_X = -0.7152683914405884 H2_DX_Y = -0.37036852435998924 H2_DX_Z = 0.5926367220898427 H2_DY_X = 0.5774438722383479 H2_DY_Y = 0.1644401726376543 H2_DY_Z = 0.7996986957831567 H2_DZ_X = -0.3936365107816755 H2_DZ_Y = 0.9142136434041674 H2_DZ_Z = 0.09624817709088518 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 2133 H3_OUTID2_ORIG = 2260 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 109.81278718167741 H3_P_Y = 104.61021796161613 H3_P_Z = 44.810925484259755 # Orientation: H3_DX_X = -0.36169018957487253 H3_DX_Y = 0.8522622371416162 H3_DX_Z = -0.3779276199322581 H3_DY_X = -0.5636964248301695 H3_DY_Y = -0.5227961329333937 H3_DY_Z = -0.6394767736388758 H3_DZ_X = -0.7425810039308658 H3_DZ_Y = -0.018256027285787013 H3_DZ_Z = 0.6695074085241828 ############# END of Description of junction: j41