############# Start of Description of junction: j13 # Number of strands: NUM_STRANDS = 7 LILLEY = 2HS2HS3HS3HS2HS2HS6 FINGERPRINT = 31:40:40:43:62:64:64:78:92:100:101:103:117:125:128:130:134:141:142:158:164 LOOP_LENGTH_SUM = 18 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 926 S1_NAME_ID3 = 931 S1_NUM_ID5_ORIG = 926 S1_NUM_ID3_ORIG = 931 S1_NAME2_ID5 = 928 S1_NAME2_ID3 = 929 S1_NUM2_ID5_ORIG = 928 S1_NUM2_ID3_ORIG = 929 S1_SQ2 = GA S1_SQLEN2 = 2 S1_SQ = AUGACC S1_SQLEN = 6 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 910 S2_NAME_ID3 = 917 S2_NUM_ID5_ORIG = 910 S2_NUM_ID3_ORIG = 917 S2_NAME2_ID5 = 912 S2_NAME2_ID3 = 915 S2_NUM2_ID5_ORIG = 912 S2_NUM2_ID3_ORIG = 915 S2_SQ2 = AAAC S2_SQLEN2 = 4 S2_SQ = CGAAACAU S2_SQLEN = 8 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 1039 S3_NAME_ID3 = 1047 S3_NUM_ID5_ORIG = 1039 S3_NUM_ID3_ORIG = 1047 S3_NAME2_ID5 = 1041 S3_NAME2_ID3 = 1045 S3_NUM2_ID5_ORIG = 1041 S3_NUM2_ID3_ORIG = 1045 S3_SQ2 = UUCCG S3_SQLEN2 = 5 S3_SQ = GAUUCCGGU S3_SQLEN = 9 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 1067 S4_NAME_ID3 = 1075 S4_NUM_ID5_ORIG = 1067 S4_NUM_ID3_ORIG = 1075 S4_NAME2_ID5 = 1069 S4_NAME2_ID3 = 1073 S4_NUM2_ID5_ORIG = 1069 S4_NUM2_ID3_ORIG = 1073 S4_SQ2 = CAGGA S4_SQLEN2 = 5 S4_SQ = ACCAGGAGG S4_SQLEN = 9 S4_CHAR = 0 ## Properties of strand 5 S5_NAME_ID5 = 1084 S5_NAME_ID3 = 1091 S5_NUM_ID5_ORIG = 1084 S5_NUM_ID3_ORIG = 1091 S5_NAME2_ID5 = 1086 S5_NAME2_ID3 = 1089 S5_NUM2_ID5_ORIG = 1086 S5_NUM2_ID3_ORIG = 1089 S5_SQ2 = AGAG S5_SQLEN2 = 4 S5_SQ = CCAGAGAU S5_SQLEN = 8 S5_CHAR = 0 ## Properties of strand 6 S6_NAME_ID5 = 1265 S6_NAME_ID3 = 1272 S6_NUM_ID5_ORIG = 1265 S6_NUM_ID3_ORIG = 1272 S6_NAME2_ID5 = 1267 S6_NAME2_ID3 = 1270 S6_NUM2_ID5_ORIG = 1267 S6_NUM2_ID3_ORIG = 1270 S6_SQ2 = CCGU S6_SQLEN2 = 4 S6_SQ = GUCCGUAC S6_SQLEN = 8 S6_CHAR = 0 ## Properties of strand 7 S7_NAME_ID5 = 1284 S7_NAME_ID3 = 1295 S7_NUM_ID5_ORIG = 1284 S7_NUM_ID3_ORIG = 1295 S7_NAME2_ID5 = 1286 S7_NAME2_ID3 = 1293 S7_NUM2_ID5_ORIG = 1286 S7_NUM2_ID3_ORIG = 1293 S7_SQ2 = AAUCGAGU S7_SQLEN2 = 8 S7_SQ = GUAAUCGAGUAG S7_SQLEN = 12 S7_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 928 H1_OUTID2_ORIG = 915 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 57.902584323616736 H1_P_Y = 91.52006834486639 H1_P_Z = 80.9255796025329 # Orientation: H1_DX_X = 0.1380725693077025 H1_DX_Y = -0.987106233959139 H1_DX_Z = 0.08097683918120424 H1_DY_X = 0.2377990121715925 H1_DY_Y = -0.04632827588855548 H1_DY_Z = -0.9702089056813605 H1_DZ_X = 0.9614507763869042 H1_DZ_Y = 0.15321544873870607 H1_DZ_Z = 0.22833622326037073 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 1041 H2_OUTID2_ORIG = 929 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 41.143085201832996 H2_P_Y = 83.36552507596686 H2_P_Z = 70.90480736080265 # Orientation: H2_DX_X = -0.4089547455875788 H2_DX_Y = 0.4384312201956675 H2_DX_Z = 0.8003337311516532 H2_DY_X = -0.34751256578547185 H2_DY_Y = 0.7361214882793803 H2_DY_Z = -0.5808271439202457 H2_DZ_X = -0.8437956107272626 H2_DZ_Y = -0.5156580452694328 H2_DZ_Z = -0.14868001771019124 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 9 H3_INID2 = 3 H3_OUTID2 = 7 H3_INID2_ORIG = 1069 H3_OUTID2_ORIG = 1045 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 47.61878879122237 H3_P_Y = 89.51366282920586 H3_P_Z = 98.0127000493374 # Orientation: H3_DX_X = -0.21701739262407216 H3_DX_Y = 0.9090604358108152 H3_DX_Z = 0.35568606290111404 H3_DY_X = -0.7408401779997646 H3_DY_Y = -0.3906466714978336 H3_DY_Z = 0.5463982144086117 H3_DZ_X = 0.6356565754870473 H3_DZ_Y = -0.14492861032628923 H3_DZ_Z = 0.7582456171643628 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 9 H4_INID2 = 3 H4_OUTID2 = 7 H4_INID2_ORIG = 1086 H4_OUTID2_ORIG = 1073 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 33.02369710677219 H4_P_Y = 101.87108105721325 H4_P_Z = 104.09324143782257 # Orientation: H4_DX_X = -0.9826255029037725 H4_DX_Y = 0.16626502943238108 H4_DX_Z = 0.08248067065058251 H4_DY_X = -0.03832418973887286 H4_DY_Y = -0.6165888592206983 H4_DY_Z = 0.786351979183479 H4_DZ_X = 0.1815994975873636 H4_DZ_Y = 0.7695285041327367 H4_DZ_Z = 0.6122479104114973 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 8 H5_INID2 = 3 H5_OUTID2 = 6 H5_INID2_ORIG = 1267 H5_OUTID2_ORIG = 1089 H5_INSEQ_CHAR = 0 H5_OUTSEQ_CHAR = 0 # Position: H5_P_X = 12.199214122671798 H5_P_Y = 97.13983090611629 H5_P_Z = 94.0846844835749 # Orientation: H5_DX_X = -0.14736273979716863 H5_DX_Y = 0.9377088004700198 H5_DX_Z = -0.3146210870881845 H5_DY_X = -0.9731262162511811 H5_DY_Y = -0.08054831911547922 H5_DY_Z = 0.21572513885108435 H5_DZ_X = 0.17694516146004347 H5_DZ_Y = 0.3379558755351866 H5_DZ_Z = 0.9243788379377378 ## Properties of helix 6 H6_INID = 1 H6_OUTID = 8 H6_INID2 = 3 H6_OUTID2 = 6 H6_INID2_ORIG = 1286 H6_OUTID2_ORIG = 1270 H6_INSEQ_CHAR = 0 H6_OUTSEQ_CHAR = 0 # Position: H6_P_X = 10.151982887391735 H6_P_Y = 89.98530619436525 H6_P_Z = 72.66270254108628 # Orientation: H6_DX_X = 0.7004657365029843 H6_DX_Y = -0.6618750348420548 H6_DX_Z = 0.26696290049022764 H6_DY_X = -0.7075111867062187 H6_DY_Y = -0.6930934508030333 H6_DY_Z = 0.13801952448652344 H6_DZ_X = 0.09367856035875555 H6_DZ_Y = -0.28555718640362215 H6_DZ_Z = -0.9537722058344684 ## Properties of helix 7 H7_INID = 1 H7_OUTID = 12 H7_INID2 = 3 H7_OUTID2 = 10 H7_INID2_ORIG = 912 H7_OUTID2_ORIG = 1293 H7_INSEQ_CHAR = 0 H7_OUTSEQ_CHAR = 0 # Position: H7_P_X = 31.01033187170422 H7_P_Y = 99.81186125966549 H7_P_Z = 77.76185712534193 # Orientation: H7_DX_X = 0.9651010141693348 H7_DX_Y = -0.20938769938041446 H7_DX_Z = -0.1572794449300119 H7_DY_X = -0.25620251536534866 H7_DY_Y = -0.8792921760225596 H7_DY_Z = -0.40150409749585947 H7_DZ_X = -0.054224566109656536 H7_DZ_Y = 0.42778740109272917 H7_DZ_Z = -0.902251426098374 ############# END of Description of junction: j13