############# Start of Description of junction: j13 # Number of strands: NUM_STRANDS = 7 LILLEY = 2HS2HS3HS3HS2HS2HS6 FINGERPRINT = 30:39:42:42:62:64:65:78:93:100:102:104:119:123:129:131:134:142:143:155:163 LOOP_LENGTH_SUM = 18 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 926 S1_NAME_ID3 = 931 S1_NUM_ID5_ORIG = 926 S1_NUM_ID3_ORIG = 931 S1_NAME2_ID5 = 928 S1_NAME2_ID3 = 929 S1_NUM2_ID5_ORIG = 928 S1_NUM2_ID3_ORIG = 929 S1_SQ2 = GA S1_SQLEN2 = 2 S1_SQ = AUGACC S1_SQLEN = 6 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 910 S2_NAME_ID3 = 917 S2_NUM_ID5_ORIG = 910 S2_NUM_ID3_ORIG = 917 S2_NAME2_ID5 = 912 S2_NAME2_ID3 = 915 S2_NUM2_ID5_ORIG = 912 S2_NUM2_ID3_ORIG = 915 S2_SQ2 = AAAC S2_SQLEN2 = 4 S2_SQ = CGAAACAU S2_SQLEN = 8 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 1039 S3_NAME_ID3 = 1047 S3_NUM_ID5_ORIG = 1039 S3_NUM_ID3_ORIG = 1047 S3_NAME2_ID5 = 1041 S3_NAME2_ID3 = 1045 S3_NUM2_ID5_ORIG = 1041 S3_NUM2_ID3_ORIG = 1045 S3_SQ2 = UUCCG S3_SQLEN2 = 5 S3_SQ = GAUUCCGGU S3_SQLEN = 9 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 1067 S4_NAME_ID3 = 1075 S4_NUM_ID5_ORIG = 1067 S4_NUM_ID3_ORIG = 1075 S4_NAME2_ID5 = 1069 S4_NAME2_ID3 = 1073 S4_NUM2_ID5_ORIG = 1069 S4_NUM2_ID3_ORIG = 1073 S4_SQ2 = CAGGA S4_SQLEN2 = 5 S4_SQ = ACCAGGAGG S4_SQLEN = 9 S4_CHAR = 0 ## Properties of strand 5 S5_NAME_ID5 = 1084 S5_NAME_ID3 = 1091 S5_NUM_ID5_ORIG = 1084 S5_NUM_ID3_ORIG = 1091 S5_NAME2_ID5 = 1086 S5_NAME2_ID3 = 1089 S5_NUM2_ID5_ORIG = 1086 S5_NUM2_ID3_ORIG = 1089 S5_SQ2 = AGAG S5_SQLEN2 = 4 S5_SQ = CCAGAGAU S5_SQLEN = 8 S5_CHAR = 0 ## Properties of strand 6 S6_NAME_ID5 = 1265 S6_NAME_ID3 = 1272 S6_NUM_ID5_ORIG = 1265 S6_NUM_ID3_ORIG = 1272 S6_NAME2_ID5 = 1267 S6_NAME2_ID3 = 1270 S6_NUM2_ID5_ORIG = 1267 S6_NUM2_ID3_ORIG = 1270 S6_SQ2 = CCGU S6_SQLEN2 = 4 S6_SQ = GUCCGUAC S6_SQLEN = 8 S6_CHAR = 0 ## Properties of strand 7 S7_NAME_ID5 = 1284 S7_NAME_ID3 = 1295 S7_NUM_ID5_ORIG = 1284 S7_NUM_ID3_ORIG = 1295 S7_NAME2_ID5 = 1286 S7_NAME2_ID3 = 1293 S7_NUM2_ID5_ORIG = 1286 S7_NUM2_ID3_ORIG = 1293 S7_SQ2 = AAUCGAGU S7_SQLEN2 = 8 S7_SQ = GUAAUCGAGUAG S7_SQLEN = 12 S7_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 928 H1_OUTID2_ORIG = 915 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 57.9022361761665 H1_P_Y = 91.03660048126955 H1_P_Z = 81.01056780896343 # Orientation: H1_DX_X = 0.12444928801131994 H1_DX_Y = -0.9906298268630849 H1_DX_Z = 0.05625762919528654 H1_DY_X = 0.23467585080284437 H1_DY_Y = -0.025703039784147563 H1_DY_Z = -0.9717338106682405 H1_DZ_X = 0.9640744887006605 H1_DZ_Y = 0.13413388786975133 H1_DZ_Z = 0.22927817244890036 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 1041 H2_OUTID2_ORIG = 929 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 40.95664806193542 H2_P_Y = 83.24464191023911 H2_P_Z = 70.75160733426024 # Orientation: H2_DX_X = -0.4124680615290899 H2_DX_Y = 0.41634829579381005 H2_DX_Z = 0.8102618063366975 H2_DY_X = -0.3724039765392959 H2_DY_Y = 0.7346677710256131 H2_DY_Z = -0.5670789578832824 H2_DZ_X = -0.8313755929038109 H2_DZ_Y = -0.5356466772097548 H2_DZ_Z = -0.14797723040385335 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 9 H3_INID2 = 3 H3_OUTID2 = 7 H3_INID2_ORIG = 1069 H3_OUTID2_ORIG = 1045 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 47.55281485732119 H3_P_Y = 89.27170781989898 H3_P_Z = 97.9079292673235 # Orientation: H3_DX_X = -0.2194166070510022 H3_DX_Y = 0.9046700027095227 H3_DX_Z = 0.36527871378957855 H3_DY_X = -0.7569543835090826 H3_DY_Y = -0.394066749110209 H3_DY_Z = 0.5212786764602129 H3_DZ_X = 0.6155293769078867 H3_DZ_Y = -0.16212212508864354 H3_DZ_Z = 0.7712587132215276 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 9 H4_INID2 = 3 H4_OUTID2 = 7 H4_INID2_ORIG = 1086 H4_OUTID2_ORIG = 1073 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 33.133826871424496 H4_P_Y = 101.39616365603923 H4_P_Z = 104.12752211936986 # Orientation: H4_DX_X = -0.9793530947437858 H4_DX_Y = 0.18998080509645376 H4_DX_Z = 0.06909999645924358 H4_DY_X = -0.06448941725508206 H4_DY_Y = -0.6175565508878975 H4_DY_Z = 0.7838781930361023 H4_DZ_X = 0.19159496569028533 H4_DZ_Y = 0.7632373157480856 H4_DZ_Z = 0.6170576707016835 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 8 H5_INID2 = 3 H5_OUTID2 = 6 H5_INID2_ORIG = 1267 H5_OUTID2_ORIG = 1089 H5_INSEQ_CHAR = 0 H5_OUTSEQ_CHAR = 0 # Position: H5_P_X = 12.130653197511467 H5_P_Y = 96.65656575832556 H5_P_Z = 94.18715398004132 # Orientation: H5_DX_X = -0.13826723820735687 H5_DX_Y = 0.936949672678665 H5_DX_Z = -0.3209477865726029 H5_DY_X = -0.9713787129433715 H5_DY_Y = -0.0650961297737922 H5_DY_Z = 0.22844231203728782 H5_DZ_X = 0.19314649072394374 H5_DZ_Y = 0.34334793541802355 H5_DZ_Z = 0.9191336292211361 ## Properties of helix 6 H6_INID = 1 H6_OUTID = 8 H6_INID2 = 3 H6_OUTID2 = 6 H6_INID2_ORIG = 1286 H6_OUTID2_ORIG = 1270 H6_INSEQ_CHAR = 0 H6_OUTSEQ_CHAR = 0 # Position: H6_P_X = 10.002151264549301 H6_P_Y = 89.70519123438267 H6_P_Z = 72.39779244010363 # Orientation: H6_DX_X = 0.6957853261324409 H6_DX_Y = -0.66750163817062 H6_DX_Z = 0.26518737333876174 H6_DY_X = -0.7120967487436243 H6_DY_Y = -0.6893094475905741 H6_DY_Z = 0.13330681112057619 H6_DZ_X = 0.09381364702185202 H6_DZ_Y = -0.28159198941359875 H6_DZ_Z = -0.9549371451203257 ## Properties of helix 7 H7_INID = 1 H7_OUTID = 12 H7_INID2 = 3 H7_OUTID2 = 10 H7_INID2_ORIG = 912 H7_OUTID2_ORIG = 1293 H7_INSEQ_CHAR = 0 H7_OUTSEQ_CHAR = 0 # Position: H7_P_X = 30.89745860529152 H7_P_Y = 99.47984567769855 H7_P_Z = 77.63095392267479 # Orientation: H7_DX_X = 0.9591846416805581 H7_DX_Y = -0.22974343953264054 H7_DX_Z = -0.16487199627545124 H7_DY_X = -0.27753998983808614 H7_DY_Y = -0.8765682342603753 H7_DY_Z = -0.39319166411092965 H7_DZ_X = -0.054188349345754006 H7_DZ_Y = 0.4229019776228995 H7_DZ_Z = -0.9045537795608567 ############# END of Description of junction: j13