############# Start of Description of junction: j90 # Number of strands: NUM_STRANDS = 3 LILLEY = HS4HS10HS11 FINGERPRINT = 60:145:148 LOOP_LENGTH_SUM = 25 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 3066 S1_NAME_ID3 = 3080 S1_NUM_ID5_ORIG = 3066 S1_NUM_ID3_ORIG = 3080 S1_NAME2_ID5 = 3067 S1_NAME2_ID3 = 3079 S1_NUM2_ID5_ORIG = 3067 S1_NUM2_ID3_ORIG = 3079 S1_SQ2 = CGUUCCGGGGAGU S1_SQLEN2 = 13 S1_SQ = GCGUUCCGGGGAGUA S1_SQLEN = 15 S1_CHAR = 9 ## Properties of strand 2 S2_NAME_ID5 = 3008 S2_NAME_ID3 = 3015 S2_NUM_ID5_ORIG = 3008 S2_NUM_ID3_ORIG = 3015 S2_NAME2_ID5 = 3009 S2_NAME2_ID3 = 3014 S2_NUM2_ID5_ORIG = 3009 S2_NUM2_ID3_ORIG = 3014 S2_SQ2 = CCACAG S2_SQLEN2 = 6 S2_SQ = GCCACAGC S2_SQLEN = 8 S2_CHAR = 9 ## Properties of strand 3 S3_NAME_ID5 = 3102 S3_NAME_ID3 = 3115 S3_NUM_ID5_ORIG = 3102 S3_NUM_ID3_ORIG = 3115 S3_NAME2_ID5 = 3103 S3_NAME2_ID3 = 3114 S3_NUM2_ID5_ORIG = 3103 S3_NUM2_ID3_ORIG = 3114 S3_SQ2 = AAACCCGGUUCG S3_SQLEN2 = 12 S3_SQ = GAAACCCGGUUCGC S3_SQLEN = 14 S3_CHAR = 9 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 2 H1_OUTID2 = 7 H1_INID2_ORIG = 3067 H1_OUTID2_ORIG = 3014 H1_INSEQ_CHAR = 9 H1_OUTSEQ_CHAR = 9 # Position: H1_P_X = 57.6524235530215 H1_P_Y = 31.305430700645385 H1_P_Z = 117.62197700252923 # Orientation: H1_DX_X = 0.8286269978112486 H1_DX_Y = 0.3532124541068242 H1_DX_Z = -0.43430203863458416 H1_DY_X = 0.3861402521328827 H1_DY_Y = 0.20106494423123777 H1_DY_Z = 0.9002602922955276 H1_DZ_X = 0.40530606235420663 H1_DZ_Y = -0.9136814819537094 H1_DZ_Z = 0.030218295018130448 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 15 H2_INID2 = 2 H2_OUTID2 = 14 H2_INID2_ORIG = 3103 H2_OUTID2_ORIG = 3079 H2_INSEQ_CHAR = 9 H2_OUTSEQ_CHAR = 9 # Position: H2_P_X = 37.36137400079413 H2_P_Y = 67.64486212588602 H2_P_Z = 117.87850770517801 # Orientation: H2_DX_X = 0.8950765873669795 H2_DX_Y = -0.036900832637940084 H2_DX_Z = 0.44438297818223305 H2_DY_X = 0.4274875325703462 H2_DY_Y = -0.21249921780351144 H2_DY_Z = -0.8786913519147816 H2_DZ_X = 0.12685547778634287 H2_DZ_Y = 0.976464239480137 H2_DZ_Z = -0.17442842879553666 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 14 H3_INID2 = 2 H3_OUTID2 = 13 H3_INID2_ORIG = 3009 H3_OUTID2_ORIG = 3114 H3_INSEQ_CHAR = 9 H3_OUTSEQ_CHAR = 9 # Position: H3_P_X = 54.3870510830516 H3_P_Y = 27.878632857036447 H3_P_Z = 99.66532288742813 # Orientation: H3_DX_X = -0.7062731722939972 H3_DX_Y = 0.3320750406032644 H3_DX_Z = 0.6252234588577892 H3_DY_X = -0.43049664560127354 H3_DY_Y = 0.4996477481727588 H3_DY_Z = -0.751681292751087 H3_DZ_X = -0.5620060891341154 H3_DZ_Y = -0.800048932974871 H3_DZ_Z = -0.20993060906391747 ############# END of Description of junction: j90