############# Start of Description of junction: j1 # Number of strands: NUM_STRANDS = 3 LILLEY = 2HS2HS4 FINGERPRINT = 62:130:168 LOOP_LENGTH_SUM = 6 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 64 S1_NAME_ID3 = 73 S1_NUM_ID5_ORIG = 64 S1_NUM_ID3_ORIG = 73 S1_NAME2_ID5 = 66 S1_NAME2_ID3 = 71 S1_NUM2_ID5_ORIG = 66 S1_NUM2_ID3_ORIG = 71 S1_SQ2 = GAUAAG S1_SQLEN2 = 6 S1_SQ = GCGAUAAGCC S1_SQLEN = 10 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 50 S2_NAME_ID3 = 55 S2_NUM_ID5_ORIG = 50 S2_NUM_ID3_ORIG = 55 S2_NAME2_ID5 = 52 S2_NAME2_ID3 = 53 S2_NUM2_ID5_ORIG = 52 S2_NUM2_ID3_ORIG = 53 S2_SQ2 = AC S2_SQLEN2 = 2 S2_SQ = GGACGU S2_SQLEN = 6 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 104 S3_NAME_ID3 = 111 S3_NUM_ID5_ORIG = 104 S3_NUM_ID3_ORIG = 111 S3_NAME2_ID5 = 106 S3_NAME2_ID3 = 109 S3_NUM2_ID5_ORIG = 106 S3_NUM2_ID3_ORIG = 109 S3_SQ2 = AUUU S3_SQLEN2 = 4 S3_SQ = GGAUUUCC S3_SQLEN = 8 S3_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 66 H1_OUTID2_ORIG = 53 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 54.60129510770214 H1_P_Y = 155.56168945763852 H1_P_Z = 42.55154516739736 # Orientation: H1_DX_X = 0.17689407199129192 H1_DX_Y = 0.8381308652969324 H1_DX_Z = -0.5159894765699917 H1_DY_X = -0.7338355061505553 H1_DY_Y = -0.23705221098134643 H1_DY_Z = -0.6366252423377716 H1_DZ_X = -0.6558917114944407 H1_DZ_Y = 0.49126663015667305 H1_DZ_Z = 0.5731170568805339 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 10 H2_INID2 = 3 H2_OUTID2 = 8 H2_INID2_ORIG = 106 H2_OUTID2_ORIG = 71 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 47.050174379622405 H2_P_Y = 152.57616676327189 H2_P_Z = 21.080205795873262 # Orientation: H2_DX_X = 0.4347102433932619 H2_DX_Y = 0.7759493057180009 H2_DX_Z = -0.45708826198523766 H2_DY_X = 0.19800157728782608 H2_DY_Y = -0.5774853443804489 H2_DY_Z = -0.792026547798315 H2_DZ_X = -0.8785342222591552 H2_DZ_Y = 0.25379785653450426 H2_DZ_Z = -0.4046779810392387 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 52 H3_OUTID2_ORIG = 109 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 68.09991307916293 H3_P_Y = 148.2486397840464 H3_P_Z = 31.576291750937482 # Orientation: H3_DX_X = 0.5944601736844248 H3_DX_Y = 0.422003337037836 H3_DX_Z = 0.6844927212410816 H3_DY_X = -0.131034320057708 H3_DY_Y = -0.789012512404696 H3_DY_Z = 0.6002410034609973 H3_DZ_X = 0.7933770281966162 H3_DZ_Y = -0.4465114094822127 H3_DZ_Z = -0.4137395948324425 ############# END of Description of junction: j1