############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS2 FINGERPRINT = 141 LOOP_LENGTH_SUM = 3 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 354 S1_NAME_ID3 = 361 S1_NUM_ID5_ORIG = 354 S1_NUM_ID3_ORIG = 361 S1_NAME2_ID5 = 356 S1_NAME2_ID3 = 359 S1_NUM2_ID5_ORIG = 356 S1_NUM2_ID3_ORIG = 359 S1_SQ2 = CAGU S1_SQLEN2 = 4 S1_SQ = ACCAGUAC S1_SQLEN = 8 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 291 S2_NAME_ID3 = 297 S2_NUM_ID5_ORIG = 291 S2_NUM_ID3_ORIG = 297 S2_NAME2_ID5 = 293 S2_NAME2_ID3 = 295 S2_NUM2_ID5_ORIG = 293 S2_NUM2_ID3_ORIG = 295 S2_SQ2 = ACC S2_SQLEN2 = 3 S2_SQ = CGACCGU S2_SQLEN = 7 S2_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 356 H1_OUTID2_ORIG = 295 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 39.38148588492069 H1_P_Y = 128.09573420476528 H1_P_Z = 14.501038497471068 # Orientation: H1_DX_X = 0.11347463248824141 H1_DX_Y = -0.7871308039450327 H1_DX_Z = 0.6062578702685002 H1_DY_X = 0.623184191908976 H1_DY_Y = 0.5316297151691458 H1_DY_Z = 0.5735950739885567 H1_DZ_X = -0.7737990506174199 H1_DZ_Y = 0.31272183075381577 H1_DZ_Z = 0.5508539605317946 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 293 H2_OUTID2_ORIG = 359 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 59.8090899669749 H2_P_Y = 118.90234517097093 H2_P_Z = 1.2223009838184495 # Orientation: H2_DX_X = -0.9452945524522534 H2_DX_Y = -0.326212898931729 H2_DX_Z = 0.0018313040867523611 H2_DY_X = -0.2122960231222777 H2_DY_Y = 0.6109063255922962 H2_DY_Z = -0.7627082403631058 H2_DZ_X = 0.2476865108772799 H2_DZ_Y = -0.7213727233004334 H2_DZ_Z = -0.6467401227754142 ############# END of Description of junction: j4