############# Start of Description of junction: j55 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS1HS6HS2 FINGERPRINT = 19:46:60:149:149:154 LOOP_LENGTH_SUM = 9 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1945 S1_NAME_ID3 = 1948 S1_NUM_ID5_ORIG = 1945 S1_NUM_ID3_ORIG = 1948 S1_NAME2_ID5 = 1946 S1_NAME2_ID3 = 1947 S1_NUM2_ID5_ORIG = 1946 S1_NUM2_ID3_ORIG = 1947 S1_SQ2 = CG S1_SQLEN2 = 2 S1_SQ = GCGG S1_SQLEN = 4 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 1888 S2_NAME_ID3 = 1892 S2_NUM_ID5_ORIG = 1888 S2_NUM_ID3_ORIG = 1892 S2_NAME2_ID5 = 1889 S2_NAME2_ID3 = 1891 S2_NUM2_ID5_ORIG = 1889 S2_NUM2_ID3_ORIG = 1891 S2_SQ2 = CUG S2_SQLEN2 = 3 S2_SQ = CCUGC S2_SQLEN = 5 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 1964 S3_NAME_ID3 = 1973 S3_NUM_ID5_ORIG = 1964 S3_NUM_ID3_ORIG = 1973 S3_NAME2_ID5 = 1965 S3_NAME2_ID3 = 1972 S3_NUM2_ID5_ORIG = 1965 S3_NUM2_ID3_ORIG = 1972 S3_SQ2 = CUUAAGGU S3_SQLEN2 = 8 S3_SQ = UCUUAAGGUA S3_SQLEN = 10 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 2009 S4_NAME_ID3 = 2014 S4_NUM_ID5_ORIG = 2009 S4_NUM_ID3_ORIG = 2014 S4_NAME2_ID5 = 2010 S4_NAME2_ID3 = 2013 S4_NUM2_ID5_ORIG = 2010 S4_NUM2_ID3_ORIG = 2013 S4_SQ2 = AAUG S4_SQLEN2 = 4 S4_SQ = GAAUGG S4_SQLEN = 6 S4_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 5 H1_INID2 = 2 H1_OUTID2 = 4 H1_INID2_ORIG = 1946 H1_OUTID2_ORIG = 1891 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 115.26680971404728 H1_P_Y = 113.05091085190172 H1_P_Z = 88.2012378622501 # Orientation: H1_DX_X = 0.712673963732243 H1_DX_Y = -0.51949365029067 H1_DX_Z = 0.4714044640495558 H1_DY_X = -0.5752486104728689 H1_DY_Y = -0.8173870342917127 H1_DY_Z = -0.031104217090671682 H1_DZ_X = 0.4014783400972135 H1_DZ_Y = -0.2490075972324206 H1_DZ_Z = -0.8813684581112113 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 4 H2_INID2 = 2 H2_OUTID2 = 3 H2_INID2_ORIG = 1965 H2_OUTID2_ORIG = 1947 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 117.02977790222084 H2_P_Y = 99.31808276884418 H2_P_Z = 102.52797700538596 # Orientation: H2_DX_X = -0.9765089712888084 H2_DX_Y = -0.16836098376349184 H2_DX_Z = 0.13447976851065846 H2_DY_X = 0.18279482567008642 H2_DY_Y = -0.9777082753579691 H2_DY_Z = 0.10330817975747664 H2_DZ_X = 0.11408891576631675 H2_DZ_Y = 0.12546357018175058 H2_DZ_Z = 0.9855164188670358 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 10 H3_INID2 = 2 H3_OUTID2 = 9 H3_INID2_ORIG = 2010 H3_OUTID2_ORIG = 1972 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 113.73909159389626 H3_P_Y = 112.02545965505247 H3_P_Z = 104.77753016818998 # Orientation: H3_DX_X = 0.8795664464127526 H3_DX_Y = 0.42927032008016397 H3_DX_Z = -0.20515813082378997 H3_DY_X = -0.4757755899933187 H3_DY_Y = 0.7942014363465262 H3_DY_Z = -0.37799691330964436 H3_DZ_X = 6.740262126783136E-4 H3_DZ_Y = 0.43008263252937695 H3_DZ_Z = 0.9027892749059845 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 2 H4_OUTID2 = 5 H4_INID2_ORIG = 1889 H4_OUTID2_ORIG = 2013 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 114.56990528858442 H4_P_Y = 128.85017121273785 H4_P_Z = 92.16868845813765 # Orientation: H4_DX_X = -0.25723642781470346 H4_DX_Y = -0.8278866291966551 H4_DX_Z = 0.4984306866581818 H4_DY_X = 0.6926510376176225 H4_DY_Y = 0.20170183272119857 H4_DY_Z = 0.6924961449453377 H4_DZ_X = -0.6738426821539036 H4_DZ_Y = 0.5233737668954461 H4_DZ_Z = 0.5215514738099216 ############# END of Description of junction: j55