############# Start of Description of junction: j1 # Number of strands: NUM_STRANDS = 3 LILLEY = 2HS2HS4 FINGERPRINT = 60:128:171 LOOP_LENGTH_SUM = 6 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 64 S1_NAME_ID3 = 73 S1_NUM_ID5_ORIG = 64 S1_NUM_ID3_ORIG = 73 S1_NAME2_ID5 = 66 S1_NAME2_ID3 = 71 S1_NUM2_ID5_ORIG = 66 S1_NUM2_ID3_ORIG = 71 S1_SQ2 = GAUAAG S1_SQLEN2 = 6 S1_SQ = GCGAUAAGCC S1_SQLEN = 10 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 50 S2_NAME_ID3 = 55 S2_NUM_ID5_ORIG = 50 S2_NUM_ID3_ORIG = 55 S2_NAME2_ID5 = 52 S2_NAME2_ID3 = 53 S2_NUM2_ID5_ORIG = 52 S2_NUM2_ID3_ORIG = 53 S2_SQ2 = AC S2_SQLEN2 = 2 S2_SQ = GGACGU S2_SQLEN = 6 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 104 S3_NAME_ID3 = 111 S3_NUM_ID5_ORIG = 104 S3_NUM_ID3_ORIG = 111 S3_NAME2_ID5 = 106 S3_NAME2_ID3 = 109 S3_NUM2_ID5_ORIG = 106 S3_NUM2_ID3_ORIG = 109 S3_SQ2 = AUUU S3_SQLEN2 = 4 S3_SQ = GGAUUUCC S3_SQLEN = 8 S3_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 66 H1_OUTID2_ORIG = 53 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 54.44928054993186 H1_P_Y = 155.50965254186465 H1_P_Z = 42.34328765472847 # Orientation: H1_DX_X = 0.17886490177495773 H1_DX_Y = 0.8280893910996667 H1_DX_Z = -0.5312958754415575 H1_DY_X = -0.7210719743483409 H1_DY_Y = -0.25705760968622826 H1_DY_Z = -0.6434101282322047 H1_DZ_X = -0.6693747490923414 H1_DZ_Y = 0.4981860552550472 H1_DZ_Z = 0.5511334680701125 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 10 H2_INID2 = 3 H2_OUTID2 = 8 H2_INID2_ORIG = 106 H2_OUTID2_ORIG = 71 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 46.94456616303072 H2_P_Y = 152.4720572317521 H2_P_Z = 20.73020339396045 # Orientation: H2_DX_X = 0.44362093755543697 H2_DX_Y = 0.7819309421151672 H2_DX_Z = -0.4379320329975016 H2_DY_X = 0.19908616758202413 H2_DY_Y = -0.5624173919843827 H2_DY_Z = -0.8025281148165355 H2_DZ_X = -0.8738221567572779 H2_DZ_Y = 0.26883206459862663 H2_DZ_Z = -0.40517176530910604 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 52 H3_OUTID2_ORIG = 109 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 67.86702927045295 H3_P_Y = 148.20531155199234 H3_P_Z = 31.354237148193665 # Orientation: H3_DX_X = 0.6260117715757758 H3_DX_Y = 0.42217968353347146 H3_DX_Z = 0.6556474484508961 H3_DY_X = -0.12201474788571431 H3_DY_Y = -0.7773903179852084 H3_DY_Z = 0.6170710613869943 H3_DZ_X = 0.7702088438514352 H3_DZ_Y = -0.46629240645165737 H3_DZ_Z = -0.4351433425189626 ############# END of Description of junction: j1