#############  Start of Description of junction: j9
# Number of strands:
NUM_STRANDS = 4
LILLEY = 2HS1HS6HS8
FINGERPRINT = 48:74:117:136:146:148
LOOP_LENGTH_SUM = 15
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  479
S1_NAME_ID3 = 490
S1_NUM_ID5_ORIG =  479
S1_NUM_ID3_ORIG = 490
S1_NAME2_ID5 =  480
S1_NAME2_ID3 = 489
S1_NUM2_ID5_ORIG =  480
S1_NUM2_ID3_ORIG = 489
S1_SQ2 = CUGCAAAGUA
S1_SQLEN2 = 10
S1_SQ = GCUGCAAAGUAC
S1_SQLEN = 12
S1_CHAR = 0
## Properties of strand 2
S2_NAME_ID5 =  26
S2_NAME_ID3 = 29
S2_NUM_ID5_ORIG =  26
S2_NUM_ID3_ORIG = 29
S2_NAME2_ID5 =  27
S2_NAME2_ID3 = 28
S2_NUM2_ID5_ORIG =  27
S2_NUM2_ID3_ORIG = 28
S2_SQ2 = UG
S2_SQLEN2 = 2
S2_SQ = UUGC
S2_SQLEN = 4
S2_CHAR = 0
## Properties of strand 3
S3_NAME_ID5 =  502
S3_NAME_ID3 = 506
S3_NUM_ID5_ORIG =  502
S3_NUM_ID3_ORIG = 506
S3_NAME2_ID5 =  503
S3_NAME2_ID3 = 505
S3_NUM2_ID5_ORIG =  503
S3_NUM2_ID3_ORIG = 505
S3_SQ2 = GGC
S3_SQLEN2 = 3
S3_SQ = AGGCG
S3_SQLEN = 5
S3_CHAR = 0
## Properties of strand 4
S4_NAME_ID5 =  508
S4_NAME_ID3 = 517
S4_NUM_ID5_ORIG =  508
S4_NUM_ID3_ORIG = 517
S4_NAME2_ID5 =  509
S4_NAME2_ID3 = 516
S4_NUM2_ID5_ORIG =  509
S4_NUM2_ID3_ORIG = 516
S4_SQ2 = AUAGAGCA
S4_SQLEN2 = 8
S4_SQ = AAUAGAGCAU
S4_SQLEN = 10
S4_CHAR = 0
## Properties of helix 1
H1_INID = 1
H1_OUTID = 4
H1_INID2 = 2
H1_OUTID2 = 3
H1_INID2_ORIG = 480
H1_OUTID2_ORIG = 28
H1_INSEQ_CHAR = 0
H1_OUTSEQ_CHAR = 0
# Position:
H1_P_X = 33.26440394535962
H1_P_Y = 133.5959972524315
H1_P_Z = 56.8005345384662
# Orientation:
H1_DX_X = -0.7794292315023981
H1_DX_Y = 0.18100574391797863
H1_DX_Z = -0.5997724516416767
H1_DY_X = 0.49569205309590814
H1_DY_Y = 0.7636281861331327
H1_DY_Z = -0.41371654769976374
H1_DZ_X = 0.383118077852167
H1_DZ_Y = -0.6197652087780909
H1_DZ_Z = -0.6849172390961655
## Properties of helix 2
H2_INID = 1
H2_OUTID = 12
H2_INID2 = 2
H2_OUTID2 = 11
H2_INID2_ORIG = 503
H2_OUTID2_ORIG = 489
H2_INSEQ_CHAR = 0
H2_OUTSEQ_CHAR = 0
# Position:
H2_P_X = 23.341771773907002
H2_P_Y = 168.95723810769593
H2_P_Z = 65.28046635795943
# Orientation:
H2_DX_X = -0.4280749008876441
H2_DX_Y = 0.6744732482773941
H2_DX_Z = -0.6015294810632099
H2_DY_X = -0.6702772229812908
H2_DY_Y = 0.2095156104485909
H2_DY_Z = 0.7119211004955872
H2_DZ_X = 0.6062015535962608
H2_DZ_Y = 0.7079470646428945
H2_DZ_Z = 0.36239568165333935
## Properties of helix 3
H3_INID = 1
H3_OUTID = 5
H3_INID2 = 2
H3_OUTID2 = 4
H3_INID2_ORIG = 509
H3_OUTID2_ORIG = 505
H3_INSEQ_CHAR = 0
H3_OUTSEQ_CHAR = 0
# Position:
H3_P_X = 7.24594218156175
H3_P_Y = 156.15224399443127
H3_P_Z = 57.345622400097795
# Orientation:
H3_DX_X = 0.8245132011880685
H3_DX_Y = 0.20585881839025433
H3_DX_Z = -0.5270674795105066
H3_DY_X = 0.399636075624505
H3_DY_Y = -0.8712882301205127
H3_DY_Z = 0.2848645767955418
H3_DZ_X = -0.40058580619642115
H3_DZ_Y = -0.4455097832196486
H3_DZ_Z = -0.8006572580883358
## Properties of helix 4
H4_INID = 1
H4_OUTID = 10
H4_INID2 = 2
H4_OUTID2 = 9
H4_INID2_ORIG = 27
H4_OUTID2_ORIG = 516
H4_INSEQ_CHAR = 0
H4_OUTSEQ_CHAR = 0
# Position:
H4_P_X = 28.10266176205309
H4_P_Y = 140.74311641684557
H4_P_Z = 66.5983843110412
# Orientation:
H4_DX_X = -0.9627765197269582
H4_DX_Y = -0.13815622069665778
H4_DX_Z = -0.23232354970012636
H4_DY_X = 0.10610267705181187
H4_DY_Y = -0.9836866017432158
H4_DY_Z = 0.14526834298409597
H4_DZ_X = -0.24860328836298962
H4_DZ_Y = 0.11521079911938159
H4_DZ_Z = 0.9617291077956338
#############  END of Description of junction: j9