############# Start of Description of junction: j1 # Number of strands: NUM_STRANDS = 3 LILLEY = 2HS2HS4 FINGERPRINT = 61:128:171 LOOP_LENGTH_SUM = 6 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 64 S1_NAME_ID3 = 73 S1_NUM_ID5_ORIG = 64 S1_NUM_ID3_ORIG = 73 S1_NAME2_ID5 = 66 S1_NAME2_ID3 = 71 S1_NUM2_ID5_ORIG = 66 S1_NUM2_ID3_ORIG = 71 S1_SQ2 = GAUAAG S1_SQLEN2 = 6 S1_SQ = GCGAUAAGCC S1_SQLEN = 10 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 50 S2_NAME_ID3 = 55 S2_NUM_ID5_ORIG = 50 S2_NUM_ID3_ORIG = 55 S2_NAME2_ID5 = 52 S2_NAME2_ID3 = 53 S2_NUM2_ID5_ORIG = 52 S2_NUM2_ID3_ORIG = 53 S2_SQ2 = AC S2_SQLEN2 = 2 S2_SQ = GGACGU S2_SQLEN = 6 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 104 S3_NAME_ID3 = 111 S3_NUM_ID5_ORIG = 104 S3_NUM_ID3_ORIG = 111 S3_NAME2_ID5 = 106 S3_NAME2_ID3 = 109 S3_NUM2_ID5_ORIG = 106 S3_NUM2_ID3_ORIG = 109 S3_SQ2 = AUUU S3_SQLEN2 = 4 S3_SQ = GGAUUUCC S3_SQLEN = 8 S3_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 66 H1_OUTID2_ORIG = 53 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 54.511397880394036 H1_P_Y = 155.21661852705634 H1_P_Z = 42.49314278098905 # Orientation: H1_DX_X = 0.1744403685141407 H1_DX_Y = 0.8385838101607703 H1_DX_Z = -0.5160888985135372 H1_DY_X = -0.7230908533058837 H1_DY_Y = -0.24666522045842498 H1_DY_Z = -0.6452099556590554 H1_DZ_X = -0.6683638048982061 H1_DZ_Y = 0.48572982444201784 H1_DZ_Z = 0.5633439109012599 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 10 H2_INID2 = 3 H2_OUTID2 = 8 H2_INID2_ORIG = 106 H2_OUTID2_ORIG = 71 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 46.781645241781625 H2_P_Y = 152.51366228756095 H2_P_Z = 20.810373511394836 # Orientation: H2_DX_X = 0.4442989008534255 H2_DX_Y = 0.7691936256177314 H2_DX_Z = -0.45928167066571746 H2_DY_X = 0.18727883403463608 H2_DY_Y = -0.5810785044906481 H2_DY_Z = -0.7920065719055245 H2_DZ_X = -0.8760851128874805 H2_DZ_Y = 0.26587391359055346 H2_DZ_Z = -0.4022262262073042 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 52 H3_OUTID2_ORIG = 109 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 67.77435371371946 H3_P_Y = 148.06228461174985 H3_P_Z = 31.346480323312793 # Orientation: H3_DX_X = 0.6311481103394811 H3_DX_Y = 0.42963141797008575 H3_DX_Z = 0.6458087236232615 H3_DY_X = -0.0921854317161177 H3_DY_Y = -0.7851416361201018 H3_DY_Z = 0.6124168983706753 H3_DZ_X = 0.7701648583220475 H3_DZ_Y = -0.44605992413988815 H3_DZ_Z = -0.45593490224166544 ############# END of Description of junction: j1