############# Start of Description of junction: j40 # Number of strands: NUM_STRANDS = 3 LILLEY = HS1HS16HS3 FINGERPRINT = 67:132:161 LOOP_LENGTH_SUM = 20 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2362 S1_NAME_ID3 = 2383 S1_NUM_ID5_ORIG = 2362 S1_NUM_ID3_ORIG = 2383 S1_NAME2_ID5 = 2364 S1_NAME2_ID3 = 2381 S1_NUM2_ID5_ORIG = 2364 S1_NUM2_ID3_ORIG = 2381 S1_SQ2 = AGCAAAAGAUAGCUUGAC S1_SQLEN2 = 18 S1_SQ = AGAGCAAAAGAUAGCUUGACAG S1_SQLEN = 22 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 2416 S2_NAME_ID3 = 2424 S2_NUM_ID5_ORIG = 2416 S2_NUM_ID3_ORIG = 2424 S2_NAME2_ID5 = 2418 S2_NAME2_ID3 = 2422 S2_NUM2_ID5_ORIG = 2418 S2_NUM2_ID3_ORIG = 2422 S2_SQ2 = GUGGU S2_SQLEN2 = 5 S2_SQ = GCGUGGUCU S2_SQLEN = 9 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 2405 S3_NAME_ID3 = 2411 S3_NUM_ID5_ORIG = 2405 S3_NUM_ID3_ORIG = 2411 S3_NAME2_ID5 = 2407 S3_NAME2_ID3 = 2409 S3_NUM2_ID5_ORIG = 2407 S3_NUM2_ID3_ORIG = 2409 S3_SQ2 = GAC S3_SQLEN2 = 3 S3_SQ = CUGACGC S3_SQLEN = 7 S3_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 9 H1_INID2 = 3 H1_OUTID2 = 7 H1_INID2_ORIG = 2364 H1_OUTID2_ORIG = 2422 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 76.69030273658596 H1_P_Y = 63.57960763830842 H1_P_Z = 90.28366218435244 # Orientation: H1_DX_X = -0.9574010186448305 H1_DX_Y = -0.0018992777529263094 H1_DX_Z = -0.2887554020998806 H1_DY_X = -0.20773798830283852 H1_DY_Y = 0.6991009687183976 H1_DY_Z = 0.684180359081509 H1_DZ_X = 0.20056973279569945 H1_DZ_Y = 0.7150204390652135 H1_DZ_Z = -0.6697145317261999 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 22 H2_INID2 = 3 H2_OUTID2 = 20 H2_INID2_ORIG = 2407 H2_OUTID2_ORIG = 2381 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 66.01969655843376 H2_P_Y = 55.41413533527772 H2_P_Z = 70.12237114543356 # Orientation: H2_DX_X = 0.3640595216938891 H2_DX_Y = 0.3991007836211864 H2_DX_Z = -0.8415338550391027 H2_DY_X = -0.8008653480894452 H2_DY_Y = -0.32712081219450795 H2_DY_Z = -0.5016040953369298 H2_DZ_X = -0.4754738256661284 H2_DZ_Y = 0.8565690507730039 H2_DZ_Z = 0.2005345415739157 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 7 H3_INID2 = 3 H3_OUTID2 = 5 H3_INID2_ORIG = 2418 H3_OUTID2_ORIG = 2409 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 71.6526982177714 H3_P_Y = 35.81947614400558 H3_P_Z = 70.34186384527158 # Orientation: H3_DX_X = 0.8184181217321225 H3_DX_Y = 0.31448532871603874 H3_DX_Z = 0.48092697579031096 H3_DY_X = -0.4786061677280884 H3_DY_Y = -0.09011080575952946 H3_DY_Z = 0.8733934845749616 H3_DZ_X = 0.3180061543949648 H3_DZ_Y = -0.9449756720189839 H3_DZ_Z = 0.07676630158601938 ############# END of Description of junction: j40