############# Start of Description of junction: j8 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS1HS6HS8 FINGERPRINT = 56:76:115:132:142:148 LOOP_LENGTH_SUM = 15 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 479 S1_NAME_ID3 = 490 S1_NUM_ID5_ORIG = 479 S1_NUM_ID3_ORIG = 490 S1_NAME2_ID5 = 480 S1_NAME2_ID3 = 489 S1_NUM2_ID5_ORIG = 480 S1_NUM2_ID3_ORIG = 489 S1_SQ2 = CUGCAAAGUA S1_SQLEN2 = 10 S1_SQ = GCUGCAAAGUAC S1_SQLEN = 12 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 26 S2_NAME_ID3 = 29 S2_NUM_ID5_ORIG = 26 S2_NUM_ID3_ORIG = 29 S2_NAME2_ID5 = 27 S2_NAME2_ID3 = 28 S2_NUM2_ID5_ORIG = 27 S2_NUM2_ID3_ORIG = 28 S2_SQ2 = UG S2_SQLEN2 = 2 S2_SQ = UUGC S2_SQLEN = 4 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 502 S3_NAME_ID3 = 506 S3_NUM_ID5_ORIG = 502 S3_NUM_ID3_ORIG = 506 S3_NAME2_ID5 = 503 S3_NAME2_ID3 = 505 S3_NUM2_ID5_ORIG = 503 S3_NUM2_ID3_ORIG = 505 S3_SQ2 = GGC S3_SQLEN2 = 3 S3_SQ = AGGCG S3_SQLEN = 5 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 508 S4_NAME_ID3 = 517 S4_NUM_ID5_ORIG = 508 S4_NUM_ID3_ORIG = 517 S4_NAME2_ID5 = 509 S4_NAME2_ID3 = 516 S4_NUM2_ID5_ORIG = 509 S4_NUM2_ID3_ORIG = 516 S4_SQ2 = AUAGAGCA S4_SQLEN2 = 8 S4_SQ = AAUAGAGCAU S4_SQLEN = 10 S4_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 4 H1_INID2 = 2 H1_OUTID2 = 3 H1_INID2_ORIG = 480 H1_OUTID2_ORIG = 28 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 33.255421059561705 H1_P_Y = 134.73268994724276 H1_P_Z = 57.187100286210175 # Orientation: H1_DX_X = -0.7495871363883069 H1_DX_Y = 0.138549917591007 H1_DX_Z = -0.6472426479278965 H1_DY_X = 0.5140715606667641 H1_DY_Y = 0.7378326476699044 H1_DY_Z = -0.43741675156083204 H1_DZ_X = 0.4169527017238437 H1_DZ_Y = -0.6606110083611441 H1_DZ_Z = -0.6242944338669645 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 12 H2_INID2 = 2 H2_OUTID2 = 11 H2_INID2_ORIG = 503 H2_OUTID2_ORIG = 489 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 23.494078851719596 H2_P_Y = 169.63623157477173 H2_P_Z = 65.35937375941349 # Orientation: H2_DX_X = -0.41192140954913725 H2_DX_Y = 0.6717017137324603 H2_DX_Z = -0.6157414718239664 H2_DY_X = -0.6652033219599822 H2_DY_Y = 0.24015157422130073 H2_DY_Z = 0.706987808842868 H2_DZ_X = 0.6227562065595613 H2_DZ_Y = 0.7008166872784329 H2_DZ_Z = 0.34789463638234963 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 5 H3_INID2 = 2 H3_OUTID2 = 4 H3_INID2_ORIG = 509 H3_OUTID2_ORIG = 505 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 7.418215272455706 H3_P_Y = 157.27411059333042 H3_P_Z = 57.87546060905911 # Orientation: H3_DX_X = 0.805834684991602 H3_DX_Y = 0.1692344789765059 H3_DX_Z = -0.5674417605270534 H3_DY_X = 0.36478010516041603 H3_DY_Y = -0.8967396050433933 H3_DY_Z = 0.250586423466558 H3_DZ_X = -0.4664396374062125 H3_DZ_Y = -0.40892269669481607 H3_DZ_Z = -0.7843572481874546 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 10 H4_INID2 = 2 H4_OUTID2 = 9 H4_INID2_ORIG = 27 H4_OUTID2_ORIG = 516 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 28.337276435569596 H4_P_Y = 141.51220478268058 H4_P_Z = 66.74920070449055 # Orientation: H4_DX_X = -0.9564160595525095 H4_DX_Y = -0.14676365510024425 H4_DX_Z = -0.2524455398133796 H4_DY_X = 0.10905140519218648 H4_DY_Y = -0.9814869376573654 H4_DY_Z = 0.15745215855477568 H4_DZ_X = -0.2708802540896116 H4_DZ_Y = 0.12306023220185125 H4_DZ_Z = 0.9547146522363477 ############# END of Description of junction: j8