############# Start of Description of junction: j40 # Number of strands: NUM_STRANDS = 3 LILLEY = HS1HS16HS3 FINGERPRINT = 68:132:160 LOOP_LENGTH_SUM = 20 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2362 S1_NAME_ID3 = 2383 S1_NUM_ID5_ORIG = 2362 S1_NUM_ID3_ORIG = 2383 S1_NAME2_ID5 = 2364 S1_NAME2_ID3 = 2381 S1_NUM2_ID5_ORIG = 2364 S1_NUM2_ID3_ORIG = 2381 S1_SQ2 = AGCAAAAGAUAGCUUGAC S1_SQLEN2 = 18 S1_SQ = AGAGCAAAAGAUAGCUUGACAG S1_SQLEN = 22 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 2416 S2_NAME_ID3 = 2424 S2_NUM_ID5_ORIG = 2416 S2_NUM_ID3_ORIG = 2424 S2_NAME2_ID5 = 2418 S2_NAME2_ID3 = 2422 S2_NUM2_ID5_ORIG = 2418 S2_NUM2_ID3_ORIG = 2422 S2_SQ2 = GUGGU S2_SQLEN2 = 5 S2_SQ = GCGUGGUCU S2_SQLEN = 9 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 2405 S3_NAME_ID3 = 2411 S3_NUM_ID5_ORIG = 2405 S3_NUM_ID3_ORIG = 2411 S3_NAME2_ID5 = 2407 S3_NAME2_ID3 = 2409 S3_NUM2_ID5_ORIG = 2407 S3_NUM2_ID3_ORIG = 2409 S3_SQ2 = GAC S3_SQLEN2 = 3 S3_SQ = CUGACGC S3_SQLEN = 7 S3_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 9 H1_INID2 = 3 H1_OUTID2 = 7 H1_INID2_ORIG = 2364 H1_OUTID2_ORIG = 2422 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 76.60875670409354 H1_P_Y = 63.33080175850708 H1_P_Z = 90.51194948508905 # Orientation: H1_DX_X = -0.9577655057236569 H1_DX_Y = -0.011689110919554935 H1_DX_Z = -0.2873127228853747 H1_DY_X = -0.21190545910810954 H1_DY_Y = 0.7040983722753111 H1_DY_Z = 0.6777474150149629 H1_DZ_X = 0.19437415580803474 H1_DZ_Y = 0.7100062301453249 H1_DZ_Z = -0.676838120017436 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 22 H2_INID2 = 3 H2_OUTID2 = 20 H2_INID2_ORIG = 2407 H2_OUTID2_ORIG = 2381 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 65.87283336981139 H2_P_Y = 55.45646638403095 H2_P_Z = 70.22040079787016 # Orientation: H2_DX_X = 0.3370598967725442 H2_DX_Y = 0.39289505489968235 H2_DX_Z = -0.8555840705758015 H2_DY_X = -0.8096264303760705 H2_DY_Y = -0.3428552955438917 H2_DY_Z = -0.47639824679991705 H2_DZ_X = -0.4805160447104697 H2_DZ_Y = 0.8532782208359038 H2_DZ_Z = 0.2025354502868879 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 7 H3_INID2 = 3 H3_OUTID2 = 5 H3_INID2_ORIG = 2418 H3_OUTID2_ORIG = 2409 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 71.30019293229387 H3_P_Y = 35.38311055909484 H3_P_Z = 70.50059619719696 # Orientation: H3_DX_X = 0.833632116438551 H3_DX_Y = 0.32499835911836783 H3_DX_Z = 0.4465798484174428 H3_DY_X = -0.45038141485798633 H3_DY_Y = -0.06803419210322659 H3_DY_Z = 0.8902403775696541 H3_DZ_X = 0.3197093611277211 H3_DZ_Y = -0.9432642340697726 H3_DZ_Z = 0.08965773325306259 ############# END of Description of junction: j40