############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 2 LILLEY = HS2HS3 FINGERPRINT = 165 LOOP_LENGTH_SUM = 5 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 451 S1_NAME_ID3 = 457 S1_NUM_ID5_ORIG = 451 S1_NUM_ID3_ORIG = 457 S1_NAME2_ID5 = 452 S1_NAME2_ID3 = 456 S1_NUM2_ID5_ORIG = 452 S1_NUM2_ID3_ORIG = 456 S1_SQ2 = GUGAC S1_SQLEN2 = 5 S1_SQ = AGUGACC S1_SQLEN = 7 S1_CHAR = B ## Properties of strand 2 S2_NAME_ID5 = 35 S2_NAME_ID3 = 40 S2_NUM_ID5_ORIG = 35 S2_NUM_ID3_ORIG = 40 S2_NAME2_ID5 = 36 S2_NAME2_ID3 = 39 S2_NUM2_ID5_ORIG = 36 S2_NUM2_ID3_ORIG = 39 S2_SQ2 = GCGC S2_SQLEN2 = 4 S2_SQ = GGCGCU S2_SQLEN = 6 S2_CHAR = B ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 2 H1_OUTID2 = 5 H1_INID2_ORIG = 452 H1_OUTID2_ORIG = 39 H1_INSEQ_CHAR = B H1_OUTSEQ_CHAR = B # Position: H1_P_X = -697.6677543216812 H1_P_Y = -207.60473788612782 H1_P_Z = 676.3371875446622 # Orientation: H1_DX_X = 0.24836191113536188 H1_DX_Y = -0.37005049218456065 H1_DX_Z = 0.8951977403519322 H1_DY_X = 0.49470243174152984 H1_DY_Y = -0.7460921511651861 H1_DY_Z = -0.44566355695599214 H1_DZ_X = 0.8328180264177263 H1_DZ_Y = 0.5535423517705738 H1_DZ_Z = -0.002235994195530111 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 7 H2_INID2 = 2 H2_OUTID2 = 6 H2_INID2_ORIG = 36 H2_OUTID2_ORIG = 456 H2_INSEQ_CHAR = B H2_OUTSEQ_CHAR = B # Position: H2_P_X = -715.5851880814403 H2_P_Y = -216.19634855133577 H2_P_Z = 676.6968887449817 # Orientation: H2_DX_X = -0.32831376123078826 H2_DX_Y = 0.6941145640776654 H2_DX_Z = 0.640636438334468 H2_DY_X = -0.15001784348703495 H2_DY_Y = 0.631305700878471 H2_DY_Z = -0.7608861666989242 H2_DZ_X = -0.9325796056219815 H2_DZ_Y = -0.34591629619549735 H2_DZ_Z = -0.10313677910596653 ############# END of Description of junction: j4