############# Start of Description of junction: j16 # Number of strands: NUM_STRANDS = 5 LILLEY = HS2HS2HS8HS2HS4 FINGERPRINT = 60:62:91:94:100:108:109:125:149:153 LOOP_LENGTH_SUM = 18 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 680 S1_NAME_ID3 = 685 S1_NUM_ID5_ORIG = 680 S1_NUM_ID3_ORIG = 685 S1_NAME2_ID5 = 681 S1_NAME2_ID3 = 684 S1_NUM2_ID5_ORIG = 681 S1_NUM2_ID3_ORIG = 684 S1_SQ2 = AGAC S1_SQLEN2 = 4 S1_SQ = UAGACU S1_SQLEN = 6 S1_CHAR = B ## Properties of strand 2 S2_NAME_ID5 = 592 S2_NAME_ID3 = 599 S2_NUM_ID5_ORIG = 592 S2_NUM_ID3_ORIG = 599 S2_NAME2_ID5 = 593 S2_NAME2_ID3 = 598 S2_NUM2_ID5_ORIG = 593 S2_NUM2_ID3_ORIG = 598 S2_SQ2 = CGACUU S2_SQLEN2 = 6 S2_SQ = GCGACUUA S2_SQLEN = 8 S2_CHAR = B ## Properties of strand 3 S3_NAME_ID5 = 821 S3_NAME_ID3 = 826 S3_NUM_ID5_ORIG = 821 S3_NUM_ID3_ORIG = 826 S3_NAME2_ID5 = 822 S3_NAME2_ID3 = 825 S3_NUM2_ID5_ORIG = 822 S3_NUM2_ID3_ORIG = 825 S3_SQ2 = GUUC S3_SQLEN2 = 4 S3_SQ = AGUUCU S3_SQLEN = 6 S3_CHAR = B ## Properties of strand 4 S4_NAME_ID5 = 1208 S4_NAME_ID3 = 1213 S4_NUM_ID5_ORIG = 1208 S4_NUM_ID3_ORIG = 1213 S4_NAME2_ID5 = 1209 S4_NAME2_ID3 = 1212 S4_NUM2_ID5_ORIG = 1209 S4_NUM2_ID3_ORIG = 1212 S4_SQ2 = GCGU S4_SQLEN2 = 4 S4_SQ = AGCGUU S4_SQLEN = 6 S4_CHAR = B ## Properties of strand 5 S5_NAME_ID5 = 1259 S5_NAME_ID3 = 1270 S5_NUM_ID5_ORIG = 1259 S5_NUM_ID3_ORIG = 1270 S5_NAME2_ID5 = 1260 S5_NAME2_ID3 = 1269 S5_NUM2_ID5_ORIG = 1260 S5_NUM2_ID3_ORIG = 1269 S5_SQ2 = AGUGCGGAUG S5_SQLEN2 = 10 S5_SQ = AAGUGCGGAUGC S5_SQLEN = 12 S5_CHAR = B ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 2 H1_OUTID2 = 7 H1_INID2_ORIG = 681 H1_OUTID2_ORIG = 598 H1_INSEQ_CHAR = B H1_OUTSEQ_CHAR = B # Position: H1_P_X = -882.054071769172 H1_P_Y = -26.50604715921462 H1_P_Z = 456.4066252443333 # Orientation: H1_DX_X = -0.4128633554453245 H1_DX_Y = 0.5081812255354947 H1_DX_Z = 0.7558410492581515 H1_DY_X = 0.6972933707870652 H1_DY_Y = 0.7102412858030718 H1_DY_Z = -0.09663990375230469 H1_DZ_X = -0.5859401034123266 H1_DZ_Y = 0.48714387808332305 H1_DZ_Z = -0.647584000156769 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 2 H2_OUTID2 = 5 H2_INID2_ORIG = 822 H2_OUTID2_ORIG = 684 H2_INSEQ_CHAR = B H2_OUTSEQ_CHAR = B # Position: H2_P_X = -868.4891929334472 H2_P_Y = -40.5100270588148 H2_P_Z = 464.7983783868099 # Orientation: H2_DX_X = -0.8272187154575477 H2_DX_Y = 0.3305159705266192 H2_DX_Z = 0.45438792900301905 H2_DY_X = -0.04001508468991233 H2_DY_Y = -0.8412923568199773 H2_DY_Z = 0.539097359809432 H2_DZ_X = 0.5604533787872015 H2_DZ_Y = 0.4277690540269461 H2_DZ_Z = 0.7091584072848605 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 6 H3_INID2 = 2 H3_OUTID2 = 5 H3_INID2_ORIG = 1209 H3_OUTID2_ORIG = 825 H3_INSEQ_CHAR = B H3_OUTSEQ_CHAR = B # Position: H3_P_X = -890.9687004356169 H3_P_Y = -46.07119967820243 H3_P_Z = 451.9081264947015 # Orientation: H3_DX_X = -0.3027682378336749 H3_DX_Y = -0.7451355774762689 H3_DX_Z = 0.5942258538116221 H3_DY_X = -0.7689578979300222 H3_DY_Y = -0.17736319217080876 H3_DY_Z = -0.6142035894344531 H3_DZ_X = 0.5630587406036511 H3_DZ_Y = -0.6428960018868466 H3_DZ_Z = -0.5192779461788177 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 2 H4_OUTID2 = 5 H4_INID2_ORIG = 1260 H4_OUTID2_ORIG = 1212 H4_INSEQ_CHAR = B H4_OUTSEQ_CHAR = B # Position: H4_P_X = -904.9970386282965 H4_P_Y = -37.405446244895145 H4_P_Z = 463.7024731646849 # Orientation: H4_DX_X = 0.24988297626453004 H4_DX_Y = -0.12228055254014691 H4_DX_Z = 0.9605237970210396 H4_DY_X = 0.33618270549584395 H4_DY_Y = 0.9412404473736515 H4_DY_Z = 0.0323667847235356 H4_DZ_X = -0.9080416767410497 H4_DZ_Y = 0.31482358027680846 H4_DZ_Z = 0.2763085713527289 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 12 H5_INID2 = 2 H5_OUTID2 = 11 H5_INID2_ORIG = 593 H5_OUTID2_ORIG = 1269 H5_INSEQ_CHAR = B H5_OUTSEQ_CHAR = B # Position: H5_P_X = -881.827986058828 H5_P_Y = -53.74286502771945 H5_P_Z = 479.15641137452656 # Orientation: H5_DX_X = 0.6468418891957981 H5_DX_Y = 0.7014445623998569 H5_DX_Z = 0.299284306740617 H5_DY_X = -0.745420194965277 H5_DY_Y = 0.49864272546915345 H5_DY_Z = 0.44238463498925285 H5_DZ_X = 0.16107235429922184 H5_DZ_Y = -0.509245479328321 H5_DZ_Z = 0.8454139450377056 ############# END of Description of junction: j16