############# Start of Description of junction: j90 # Number of strands: NUM_STRANDS = 3 LILLEY = HS4HS10HS11 FINGERPRINT = 63:145:145 LOOP_LENGTH_SUM = 25 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 66 S1_NAME_ID3 = 80 S1_NUM_ID5_ORIG = 66 S1_NUM_ID3_ORIG = 80 S1_NAME2_ID5 = 67 S1_NAME2_ID3 = 79 S1_NUM2_ID5_ORIG = 67 S1_NUM2_ID3_ORIG = 79 S1_SQ2 = CGUUCCGGGGAGU S1_SQLEN2 = 13 S1_SQ = GCGUUCCGGGGAGUA S1_SQLEN = 15 S1_CHAR = 9 ## Properties of strand 2 S2_NAME_ID5 = 8 S2_NAME_ID3 = 15 S2_NUM_ID5_ORIG = 8 S2_NUM_ID3_ORIG = 15 S2_NAME2_ID5 = 9 S2_NAME2_ID3 = 14 S2_NUM2_ID5_ORIG = 9 S2_NUM2_ID3_ORIG = 14 S2_SQ2 = CCACAG S2_SQLEN2 = 6 S2_SQ = GCCACAGC S2_SQLEN = 8 S2_CHAR = 9 ## Properties of strand 3 S3_NAME_ID5 = 102 S3_NAME_ID3 = 115 S3_NUM_ID5_ORIG = 102 S3_NUM_ID3_ORIG = 115 S3_NAME2_ID5 = 103 S3_NAME2_ID3 = 114 S3_NUM2_ID5_ORIG = 103 S3_NUM2_ID3_ORIG = 114 S3_SQ2 = AAACCCGGUUCG S3_SQLEN2 = 12 S3_SQ = GAAACCCGGUUCGC S3_SQLEN = 14 S3_CHAR = 9 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 2 H1_OUTID2 = 7 H1_INID2_ORIG = 67 H1_OUTID2_ORIG = 14 H1_INSEQ_CHAR = 9 H1_OUTSEQ_CHAR = 9 # Position: H1_P_X = 57.93328105950403 H1_P_Y = 31.478629889298933 H1_P_Z = 117.83382028443901 # Orientation: H1_DX_X = 0.7894789501351411 H1_DX_Y = 0.4088681633733806 H1_DX_Z = -0.4577661108832558 H1_DY_X = 0.40120017056688084 H1_DY_Y = 0.2206618744779334 H1_DY_Z = 0.8890144882334567 H1_DZ_X = 0.4645012491163101 H1_DZ_Y = -0.8855140665915826 H1_DZ_Z = 0.010169928112929938 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 15 H2_INID2 = 2 H2_OUTID2 = 14 H2_INID2_ORIG = 103 H2_OUTID2_ORIG = 79 H2_INSEQ_CHAR = 9 H2_OUTSEQ_CHAR = 9 # Position: H2_P_X = 37.41438245093467 H2_P_Y = 68.09296836653078 H2_P_Z = 117.4692941687769 # Orientation: H2_DX_X = 0.8972475691487176 H2_DX_Y = -0.033955361616406776 H2_DX_Z = 0.44022020975214105 H2_DY_X = 0.4257326488713957 H2_DY_Y = -0.1977623047341126 H2_DY_Z = -0.8829732626253275 H2_DZ_X = 0.11704063970118028 H2_DZ_Y = 0.9796617294983747 H2_DZ_Z = -0.16298584114758796 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 14 H3_INID2 = 2 H3_OUTID2 = 13 H3_INID2_ORIG = 9 H3_OUTID2_ORIG = 114 H3_INSEQ_CHAR = 9 H3_OUTSEQ_CHAR = 9 # Position: H3_P_X = 54.036791146527264 H3_P_Y = 28.068007556201366 H3_P_Z = 99.61368015092945 # Orientation: H3_DX_X = -0.7203168472394665 H3_DX_Y = 0.3257187113327191 H3_DX_Z = 0.61241404349569 H3_DY_X = -0.41967331361799864 H3_DY_Y = 0.49831818640221215 H3_DY_Z = -0.758652288560242 H3_DZ_X = -0.5522843012614871 H3_DZ_Y = -0.8034838555867587 H3_DZ_Z = -0.22225153405894105 ############# END of Description of junction: j90