############# Start of Description of junction: j88 # Number of strands: NUM_STRANDS = 3 LILLEY = HS4HS10HS11 FINGERPRINT = 63:144:147 LOOP_LENGTH_SUM = 25 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 66 S1_NAME_ID3 = 80 S1_NUM_ID5_ORIG = 66 S1_NUM_ID3_ORIG = 80 S1_NAME2_ID5 = 67 S1_NAME2_ID3 = 79 S1_NUM2_ID5_ORIG = 67 S1_NUM2_ID3_ORIG = 79 S1_SQ2 = CGUUCCGGGGAGU S1_SQLEN2 = 13 S1_SQ = GCGUUCCGGGGAGUA S1_SQLEN = 15 S1_CHAR = 4 ## Properties of strand 2 S2_NAME_ID5 = 8 S2_NAME_ID3 = 15 S2_NUM_ID5_ORIG = 8 S2_NUM_ID3_ORIG = 15 S2_NAME2_ID5 = 9 S2_NAME2_ID3 = 14 S2_NUM2_ID5_ORIG = 9 S2_NUM2_ID3_ORIG = 14 S2_SQ2 = CCACAG S2_SQLEN2 = 6 S2_SQ = GCCACAGC S2_SQLEN = 8 S2_CHAR = 4 ## Properties of strand 3 S3_NAME_ID5 = 102 S3_NAME_ID3 = 115 S3_NUM_ID5_ORIG = 102 S3_NUM_ID3_ORIG = 115 S3_NAME2_ID5 = 103 S3_NAME2_ID3 = 114 S3_NUM2_ID5_ORIG = 103 S3_NUM2_ID3_ORIG = 114 S3_SQ2 = AAACCCGGUUCG S3_SQLEN2 = 12 S3_SQ = GAAACCCGGUUCGC S3_SQLEN = 14 S3_CHAR = 4 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 2 H1_OUTID2 = 7 H1_INID2_ORIG = 67 H1_OUTID2_ORIG = 14 H1_INSEQ_CHAR = 4 H1_OUTSEQ_CHAR = 4 # Position: H1_P_X = -40.75457282214268 H1_P_Y = -66.62585619749697 H1_P_Z = -55.04951561491431 # Orientation: H1_DX_X = -0.003845562682322168 H1_DX_Y = 0.4195369597772185 H1_DX_Z = 0.9077301091340644 H1_DY_X = -0.4110351946805366 H1_DY_Y = 0.8268461653602941 H1_DY_Z = -0.38389515178352696 H1_DZ_X = -0.9116113647720638 H1_DZ_Y = -0.3745853149949312 H1_DZ_Z = 0.1692647671801808 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 15 H2_INID2 = 2 H2_OUTID2 = 14 H2_INID2_ORIG = 103 H2_OUTID2_ORIG = 79 H2_INSEQ_CHAR = 4 H2_OUTSEQ_CHAR = 4 # Position: H2_P_X = -2.5549458321497127 H2_P_Y = -51.71617792608775 H2_P_Z = -63.009796990435355 # Orientation: H2_DX_X = -0.6987111728244972 H2_DX_Y = 0.6736011037274068 H2_DX_Z = 0.24096524651376683 H2_DY_X = -0.04915921363105902 H2_DY_Y = -0.38123462947772424 H2_DY_Z = 0.9231703683514496 H2_DZ_X = 0.7137128755216593 H2_DZ_Y = 0.6331837887566323 H2_DZ_Z = 0.2994865956439483 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 14 H3_INID2 = 2 H3_OUTID2 = 13 H3_INID2_ORIG = 9 H3_OUTID2_ORIG = 114 H3_INSEQ_CHAR = 4 H3_OUTSEQ_CHAR = 4 # Position: H3_P_X = -34.23993292994217 H3_P_Y = -80.54716968663853 H3_P_Z = -44.293078190531574 # Orientation: H3_DX_X = 0.42678597443061506 H3_DX_Y = 0.206639730745394 H3_DX_Z = -0.8804281649895032 H3_DY_X = 0.8875131758638872 H3_DY_Y = -0.28269980022922425 H3_DY_Z = 0.36386973715652005 H3_DZ_X = -0.17370692184630343 H3_DZ_Y = -0.9366860971680069 H3_DZ_Z = -0.30404779340567956 ############# END of Description of junction: j88