############# Start of Description of junction: j9 # Number of strands: NUM_STRANDS = 3 LILLEY = HS1HS6HS7 FINGERPRINT = 62:120:171 LOOP_LENGTH_SUM = 14 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 321 S1_NAME_ID3 = 325 S1_NUM_ID5_ORIG = 321 S1_NUM_ID3_ORIG = 325 S1_NAME2_ID5 = 322 S1_NAME2_ID3 = 324 S1_NUM2_ID5_ORIG = 322 S1_NUM2_ID3_ORIG = 324 S1_SQ2 = GCG S1_SQLEN2 = 3 S1_SQ = AGCGU S1_SQLEN = 5 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 301 S2_NAME_ID3 = 310 S2_NUM_ID5_ORIG = 301 S2_NUM_ID3_ORIG = 310 S2_NAME2_ID5 = 302 S2_NAME2_ID3 = 309 S2_NUM2_ID5_ORIG = 302 S2_NUM2_ID3_ORIG = 309 S2_SQ2 = ACGAAGUC S2_SQLEN2 = 8 S2_SQ = GACGAAGUCU S2_SQLEN = 10 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 340 S3_NAME_ID3 = 350 S3_NUM_ID5_ORIG = 340 S3_NUM_ID3_ORIG = 350 S3_NAME2_ID5 = 341 S3_NAME2_ID3 = 349 S3_NUM2_ID5_ORIG = 341 S3_NUM2_ID3_ORIG = 349 S3_SQ2 = CCCCGUACU S3_SQLEN2 = 9 S3_SQ = ACCCCGUACUC S3_SQLEN = 11 S3_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 10 H1_INID2 = 2 H1_OUTID2 = 9 H1_INID2_ORIG = 322 H1_OUTID2_ORIG = 309 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 4.196502445762505 H1_P_Y = 140.99150654486522 H1_P_Z = 39.92216842678447 # Orientation: H1_DX_X = -0.7619108032804167 H1_DX_Y = 0.4678173724642818 H1_DX_Z = -0.44792726403424865 H1_DY_X = -0.6407234433778801 H1_DY_Y = -0.44330766884073114 H1_DY_Z = 0.6268586601882262 H1_DZ_X = 0.09468578008649597 H1_DZ_Y = 0.764607884322146 H1_DZ_Z = 0.6375024598241268 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 5 H2_INID2 = 2 H2_OUTID2 = 4 H2_INID2_ORIG = 341 H2_OUTID2_ORIG = 324 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 5.8550505803039155 H2_P_Y = 128.64305951525918 H2_P_Z = 31.967769652355393 # Orientation: H2_DX_X = -0.2173257675879965 H2_DX_Y = 0.5153178841937347 H2_DX_Z = -0.8289855179509367 H2_DY_X = 0.9728527939494427 H2_DY_Y = 0.045144503583770756 H2_DY_Z = -0.22697888690568035 H2_DZ_X = -0.07954214007085714 H2_DZ_Y = -0.8558092381052234 H2_DZ_Z = -0.5111395073037102 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 11 H3_INID2 = 2 H3_OUTID2 = 10 H3_INID2_ORIG = 302 H3_OUTID2_ORIG = 349 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 35.22331824531172 H3_P_Y = 130.98100430299465 H3_P_Z = 17.905728191933296 # Orientation: H3_DX_X = -0.5022280036235145 H3_DX_Y = 0.181143834856897 H3_DX_Z = -0.8455494920285176 H3_DY_X = 0.35959004087130353 H3_DY_Y = 0.933009758237489 H3_DY_Z = -0.0137037783037961 H3_DZ_X = 0.786423572181377 H3_DZ_Y = -0.31093359761686656 H3_DZ_Z = -0.5337211472206462 ############# END of Description of junction: j9