############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS2 FINGERPRINT = 139 LOOP_LENGTH_SUM = 3 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 354 S1_NAME_ID3 = 361 S1_NUM_ID5_ORIG = 354 S1_NUM_ID3_ORIG = 361 S1_NAME2_ID5 = 356 S1_NAME2_ID3 = 359 S1_NUM2_ID5_ORIG = 356 S1_NUM2_ID3_ORIG = 359 S1_SQ2 = CAGU S1_SQLEN2 = 4 S1_SQ = ACCAGUAC S1_SQLEN = 8 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 291 S2_NAME_ID3 = 297 S2_NUM_ID5_ORIG = 291 S2_NUM_ID3_ORIG = 297 S2_NAME2_ID5 = 293 S2_NAME2_ID3 = 295 S2_NUM2_ID5_ORIG = 293 S2_NUM2_ID3_ORIG = 295 S2_SQ2 = ACC S2_SQLEN2 = 3 S2_SQ = CGACCGU S2_SQLEN = 7 S2_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 356 H1_OUTID2_ORIG = 295 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 40.76982289216598 H1_P_Y = 128.9016968236193 H1_P_Z = 14.518864971443149 # Orientation: H1_DX_X = 0.17443537062096226 H1_DX_Y = -0.7768623803337675 H1_DX_Z = 0.6050265642915829 H1_DY_X = 0.5962627452492058 H1_DY_Y = 0.5723195403241164 H1_DY_Z = 0.5629574427885444 H1_DZ_X = -0.783608984190586 H1_DZ_Y = 0.26255510999655485 H1_DZ_Z = 0.5630468667087118 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 293 H2_OUTID2_ORIG = 359 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 61.103409909404306 H2_P_Y = 120.0944953639009 H2_P_Z = 1.4705673489727555 # Orientation: H2_DX_X = -0.9401441520304274 H2_DX_Y = -0.34075905517943283 H2_DX_Z = -0.003498530578472936 H2_DY_X = -0.2207990073565611 H2_DY_Y = 0.6169336049205612 H2_DY_Z = -0.7554076551571824 H2_DZ_X = 0.2595703599283752 H2_DZ_Y = -0.7094196173161151 H2_DZ_Z = -0.6552457819884987 ############# END of Description of junction: j4