############# Start of Description of junction: j90 # Number of strands: NUM_STRANDS = 3 LILLEY = HS4HS10HS11 FINGERPRINT = 63:145:146 LOOP_LENGTH_SUM = 25 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 3066 S1_NAME_ID3 = 3080 S1_NUM_ID5_ORIG = 3066 S1_NUM_ID3_ORIG = 3080 S1_NAME2_ID5 = 3067 S1_NAME2_ID3 = 3079 S1_NUM2_ID5_ORIG = 3067 S1_NUM2_ID3_ORIG = 3079 S1_SQ2 = CGUUCCGGGGAGU S1_SQLEN2 = 13 S1_SQ = GCGUUCCGGGGAGUA S1_SQLEN = 15 S1_CHAR = 9 ## Properties of strand 2 S2_NAME_ID5 = 3008 S2_NAME_ID3 = 3015 S2_NUM_ID5_ORIG = 3008 S2_NUM_ID3_ORIG = 3015 S2_NAME2_ID5 = 3009 S2_NAME2_ID3 = 3014 S2_NUM2_ID5_ORIG = 3009 S2_NUM2_ID3_ORIG = 3014 S2_SQ2 = CCACAG S2_SQLEN2 = 6 S2_SQ = GCCACAGC S2_SQLEN = 8 S2_CHAR = 9 ## Properties of strand 3 S3_NAME_ID5 = 3102 S3_NAME_ID3 = 3115 S3_NUM_ID5_ORIG = 3102 S3_NUM_ID3_ORIG = 3115 S3_NAME2_ID5 = 3103 S3_NAME2_ID3 = 3114 S3_NUM2_ID5_ORIG = 3103 S3_NUM2_ID3_ORIG = 3114 S3_SQ2 = AAACCCGGUUCG S3_SQLEN2 = 12 S3_SQ = GAAACCCGGUUCGC S3_SQLEN = 14 S3_CHAR = 9 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 2 H1_OUTID2 = 7 H1_INID2_ORIG = 3067 H1_OUTID2_ORIG = 3014 H1_INSEQ_CHAR = 9 H1_OUTSEQ_CHAR = 9 # Position: H1_P_X = 58.21520298787357 H1_P_Y = 31.98069233238861 H1_P_Z = 118.16921322310323 # Orientation: H1_DX_X = 0.7814260752382509 H1_DX_Y = 0.4128492703097102 H1_DX_Z = -0.467898246355432 H1_DY_X = 0.4002810673637214 H1_DY_Y = 0.2435840797324893 H1_DY_Z = 0.8834262069980952 H1_DZ_X = 0.4786944286785655 H1_DZ_Y = -0.8776230831659007 H1_DZ_Z = 0.025087204835983812 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 15 H2_INID2 = 2 H2_OUTID2 = 14 H2_INID2_ORIG = 3103 H2_OUTID2_ORIG = 3079 H2_INSEQ_CHAR = 9 H2_OUTSEQ_CHAR = 9 # Position: H2_P_X = 38.204260423757724 H2_P_Y = 68.64513763917468 H2_P_Z = 117.99702530886731 # Orientation: H2_DX_X = 0.90278913696703 H2_DX_Y = -0.006892843873160359 H2_DX_Z = 0.4300282117229841 H2_DY_X = 0.4214974987590807 H2_DY_Y = -0.18461195599590496 H2_DY_Z = -0.8878391094354896 H2_DZ_X = 0.08550808566543111 H2_DZ_Y = 0.9827873190099154 H2_DZ_Z = -0.16376035197546912 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 14 H3_INID2 = 2 H3_OUTID2 = 13 H3_INID2_ORIG = 3009 H3_OUTID2_ORIG = 3114 H3_INSEQ_CHAR = 9 H3_OUTSEQ_CHAR = 9 # Position: H3_P_X = 54.69734050126468 H3_P_Y = 28.695092410785012 H3_P_Z = 100.04120480036121 # Orientation: H3_DX_X = -0.7118718048481938 H3_DX_Y = 0.32467899136148404 H3_DX_Z = 0.6227536318887843 H3_DY_X = -0.4425057415707556 H3_DY_Y = 0.48121579099601774 H3_DY_Z = -0.7567166121957314 H3_DZ_X = -0.5453688679591906 H3_DZ_Y = -0.8142572781772159 H3_DZ_Z = -0.19889163581292735 ############# END of Description of junction: j90