############# Start of Description of junction: j25 # Number of strands: NUM_STRANDS = 3 LILLEY = HS2HS6HS3 FINGERPRINT = 72:80:146 LOOP_LENGTH_SUM = 11 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1442 S1_NAME_ID3 = 1453 S1_NUM_ID5_ORIG = 1442 S1_NUM_ID3_ORIG = 1453 S1_NAME2_ID5 = 1444 S1_NAME2_ID3 = 1451 S1_NUM2_ID5_ORIG = 1444 S1_NUM2_ID3_ORIG = 1451 S1_SQ2 = GGUUAGCC S1_SQLEN2 = 8 S1_SQ = AGGGUUAGCCGG S1_SQLEN = 12 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 1414 S2_NAME_ID3 = 1422 S2_NUM_ID5_ORIG = 1414 S2_NUM_ID3_ORIG = 1422 S2_NAME2_ID5 = 1416 S2_NAME2_ID3 = 1420 S2_NUM2_ID5_ORIG = 1416 S2_NUM2_ID3_ORIG = 1420 S2_SQ2 = GGUUC S2_SQLEN2 = 5 S2_SQ = AGGGUUCCU S2_SQLEN = 9 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 1674 S3_NAME_ID3 = 1681 S3_NUM_ID5_ORIG = 1674 S3_NUM_ID3_ORIG = 1681 S3_NAME2_ID5 = 1676 S3_NAME2_ID3 = 1679 S3_NUM2_ID5_ORIG = 1676 S3_NUM2_ID3_ORIG = 1679 S3_SQ2 = GUAC S3_SQLEN2 = 4 S3_SQ = CCGUACCG S3_SQLEN = 8 S3_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 9 H1_INID2 = 3 H1_OUTID2 = 7 H1_INID2_ORIG = 1444 H1_OUTID2_ORIG = 1420 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 56.578642384321235 H1_P_Y = 173.09403144329687 H1_P_Z = 64.47496892620713 # Orientation: H1_DX_X = 0.262517305315896 H1_DX_Y = 0.9535663478534104 H1_DX_Z = -0.14763429361504166 H1_DY_X = -0.811587558654864 H1_DY_Y = 0.13544218637542826 H1_DY_Z = -0.5683142165971873 H1_DZ_X = -0.5219294004425521 H1_DZ_Y = 0.26901047264257727 H1_DZ_Z = 0.8094585020631513 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 12 H2_INID2 = 3 H2_OUTID2 = 10 H2_INID2_ORIG = 1676 H2_OUTID2_ORIG = 1451 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 89.0524540901539 H2_P_Y = 173.16753839274133 H2_P_Z = 45.307363200994516 # Orientation: H2_DX_X = -0.09262080079624013 H2_DX_Y = -0.742300616888599 H2_DX_Z = 0.6636348253570432 H2_DY_X = -0.5195974489176933 H2_DY_Y = -0.5325202796125268 H2_DY_Z = -0.6681621381667924 H2_DZ_X = 0.8493761701025591 H2_DZ_Y = -0.4067086745671986 H2_DZ_Z = -0.33637505212739427 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 1416 H3_OUTID2_ORIG = 1679 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 80.53331792283817 H3_P_Y = 169.3330378432639 H3_P_Z = 64.6444906669022 # Orientation: H3_DX_X = -0.6219926013022814 H3_DX_Y = -0.3053923605705222 H3_DX_Z = 0.7210136684074797 H3_DY_X = 0.450878296965854 H3_DY_Y = -0.8925186164683225 H3_DY_Z = 0.010921565025967084 H3_DZ_X = 0.640182759257371 H3_DZ_Y = 0.3318825475414542 H3_DZ_Z = 0.6928347634082854 ############# END of Description of junction: j25