############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS2 FINGERPRINT = 141 LOOP_LENGTH_SUM = 3 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 354 S1_NAME_ID3 = 361 S1_NUM_ID5_ORIG = 354 S1_NUM_ID3_ORIG = 361 S1_NAME2_ID5 = 356 S1_NAME2_ID3 = 359 S1_NUM2_ID5_ORIG = 356 S1_NUM2_ID3_ORIG = 359 S1_SQ2 = CAGU S1_SQLEN2 = 4 S1_SQ = ACCAGUAC S1_SQLEN = 8 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 291 S2_NAME_ID3 = 297 S2_NUM_ID5_ORIG = 291 S2_NUM_ID3_ORIG = 297 S2_NAME2_ID5 = 293 S2_NAME2_ID3 = 295 S2_NUM2_ID5_ORIG = 293 S2_NUM2_ID3_ORIG = 295 S2_SQ2 = ACC S2_SQLEN2 = 3 S2_SQ = CGACCGU S2_SQLEN = 7 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 356 H1_OUTID2_ORIG = 295 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 39.94965499574997 H1_P_Y = 129.37391430890656 H1_P_Z = 14.425704527071707 # Orientation: H1_DX_X = 0.10323387069544765 H1_DX_Y = -0.7937796835440736 H1_DX_Z = 0.5993801647818504 H1_DY_X = 0.6178327208402621 H1_DY_Y = 0.5234253925327153 H1_DY_Z = 0.5867781416439044 H1_DZ_X = -0.7795033656119372 H1_DZ_Y = 0.30974129922347515 H1_DZ_Z = 0.544458290923199 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 293 H2_OUTID2_ORIG = 359 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 60.962068187203094 H2_P_Y = 119.81417917948204 H2_P_Z = 1.2807686983508635 # Orientation: H2_DX_X = -0.9379568740766615 H2_DX_Y = -0.3467177402380486 H2_DX_Z = 0.004869391806997747 H2_DY_X = -0.22970096454724143 H2_DY_Y = 0.6107553642088845 H2_DY_Z = -0.757769986193785 H2_DZ_X = 0.2597582900667632 H2_DZ_Y = -0.7118740715142593 H2_DZ_Z = -0.652503591597239 ############# END of Description of junction: j4