############# Start of Description of junction: j1 # Number of strands: NUM_STRANDS = 3 LILLEY = 2HS2HS4 FINGERPRINT = 62:128:170 LOOP_LENGTH_SUM = 6 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 64 S1_NAME_ID3 = 73 S1_NUM_ID5_ORIG = 64 S1_NUM_ID3_ORIG = 73 S1_NAME2_ID5 = 66 S1_NAME2_ID3 = 71 S1_NUM2_ID5_ORIG = 66 S1_NUM2_ID3_ORIG = 71 S1_SQ2 = GAUAAG S1_SQLEN2 = 6 S1_SQ = GCGAUAAGCC S1_SQLEN = 10 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 50 S2_NAME_ID3 = 55 S2_NUM_ID5_ORIG = 50 S2_NUM_ID3_ORIG = 55 S2_NAME2_ID5 = 52 S2_NAME2_ID3 = 53 S2_NUM2_ID5_ORIG = 52 S2_NUM2_ID3_ORIG = 53 S2_SQ2 = AC S2_SQLEN2 = 2 S2_SQ = GGACGU S2_SQLEN = 6 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 104 S3_NAME_ID3 = 111 S3_NUM_ID5_ORIG = 104 S3_NUM_ID3_ORIG = 111 S3_NAME2_ID5 = 106 S3_NAME2_ID3 = 109 S3_NUM2_ID5_ORIG = 106 S3_NUM2_ID3_ORIG = 109 S3_SQ2 = AUUU S3_SQLEN2 = 4 S3_SQ = GGAUUUCC S3_SQLEN = 8 S3_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 66 H1_OUTID2_ORIG = 53 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 55.01207794642477 H1_P_Y = 156.86658730542624 H1_P_Z = 42.628226157583086 # Orientation: H1_DX_X = 0.18220582104913774 H1_DX_Y = 0.8298279030066169 H1_DX_Z = -0.5274340623883376 H1_DY_X = -0.7305175066701182 H1_DY_Y = -0.24479738828779318 H1_DY_Z = -0.6375095380745037 H1_DZ_X = -0.6581376840937665 H1_DZ_Y = 0.5014577650003389 H1_DZ_Z = 0.561600301546008 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 10 H2_INID2 = 3 H2_OUTID2 = 8 H2_INID2_ORIG = 106 H2_OUTID2_ORIG = 71 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 47.76986276586727 H2_P_Y = 153.73345076520894 H2_P_Z = 20.948045257477915 # Orientation: H2_DX_X = 0.4326450514536191 H2_DX_Y = 0.7679764623996448 H2_DX_Z = -0.4722609582136208 H2_DY_X = 0.1997901923613412 H2_DY_Y = -0.5924695392248225 H2_DY_Z = -0.7804253482088797 H2_DZ_X = -0.8791485303911486 H2_DZ_Y = 0.24329405724529352 H2_DZ_Z = -0.40976317943443163 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 52 H3_OUTID2_ORIG = 109 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 68.31276387030448 H3_P_Y = 149.4764459839997 H3_P_Z = 31.80715076928371 # Orientation: H3_DX_X = 0.6284443705696674 H3_DX_Y = 0.4338204025474113 H3_DX_Z = 0.6456450506531652 H3_DY_X = -0.11015546322310854 H3_DY_Y = -0.7720332072635472 H3_DY_Z = 0.6259636577345944 H3_DZ_X = 0.7700152251880468 H3_DZ_Y = -0.46450466651691613 H3_DZ_Z = -0.43739223559936846 ############# END of Description of junction: j1