############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS2 FINGERPRINT = 140 LOOP_LENGTH_SUM = 3 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 354 S1_NAME_ID3 = 361 S1_NUM_ID5_ORIG = 354 S1_NUM_ID3_ORIG = 361 S1_NAME2_ID5 = 356 S1_NAME2_ID3 = 359 S1_NUM2_ID5_ORIG = 356 S1_NUM2_ID3_ORIG = 359 S1_SQ2 = CAGU S1_SQLEN2 = 4 S1_SQ = ACCAGUAC S1_SQLEN = 8 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 291 S2_NAME_ID3 = 297 S2_NUM_ID5_ORIG = 291 S2_NUM_ID3_ORIG = 297 S2_NAME2_ID5 = 293 S2_NAME2_ID3 = 295 S2_NUM2_ID5_ORIG = 293 S2_NUM2_ID3_ORIG = 295 S2_SQ2 = ACC S2_SQLEN2 = 3 S2_SQ = CGACCGU S2_SQLEN = 7 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 356 H1_OUTID2_ORIG = 295 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 39.954481724149275 H1_P_Y = 129.688273543529 H1_P_Z = 14.35849495229468 # Orientation: H1_DX_X = 0.12640412541927049 H1_DX_Y = -0.7967384155207071 H1_DX_Z = 0.5909567617944198 H1_DY_X = 0.6146950792013754 H1_DY_Y = 0.5304841230451132 H1_DY_Z = 0.5837264383276377 H1_DZ_X = -0.7785704571087919 H1_DZ_Y = 0.2894727835748938 H1_DZ_Z = 0.5568065650536074 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 293 H2_OUTID2_ORIG = 359 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 60.919137730815926 H2_P_Y = 120.2480967810083 H2_P_Z = 1.572470374044487 # Orientation: H2_DX_X = -0.940880938599598 H2_DX_Y = -0.33856553426582536 H2_DX_Z = 0.010790662039499965 H2_DY_X = -0.2286180292729867 H2_DY_Y = 0.6111835877028966 H2_DY_Z = -0.7577522146546013 H2_DZ_X = 0.2499537078566476 H2_DZ_Y = -0.7154215548401623 H2_DZ_Z = -0.6524531728781771 ############# END of Description of junction: j4