############# Start of Description of junction: j1 # Number of strands: NUM_STRANDS = 3 LILLEY = 2HS2HS4 FINGERPRINT = 61:126:173 LOOP_LENGTH_SUM = 6 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 64 S1_NAME_ID3 = 73 S1_NUM_ID5_ORIG = 64 S1_NUM_ID3_ORIG = 73 S1_NAME2_ID5 = 66 S1_NAME2_ID3 = 71 S1_NUM2_ID5_ORIG = 66 S1_NUM2_ID3_ORIG = 71 S1_SQ2 = GAUAAG S1_SQLEN2 = 6 S1_SQ = GCGAUAAGCC S1_SQLEN = 10 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 50 S2_NAME_ID3 = 55 S2_NUM_ID5_ORIG = 50 S2_NUM_ID3_ORIG = 55 S2_NAME2_ID5 = 52 S2_NAME2_ID3 = 53 S2_NUM2_ID5_ORIG = 52 S2_NUM2_ID3_ORIG = 53 S2_SQ2 = AC S2_SQLEN2 = 2 S2_SQ = GGACGU S2_SQLEN = 6 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 104 S3_NAME_ID3 = 111 S3_NUM_ID5_ORIG = 104 S3_NUM_ID3_ORIG = 111 S3_NAME2_ID5 = 106 S3_NAME2_ID3 = 109 S3_NUM2_ID5_ORIG = 106 S3_NUM2_ID3_ORIG = 109 S3_SQ2 = AUUU S3_SQLEN2 = 4 S3_SQ = GGAUUUCC S3_SQLEN = 8 S3_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 66 H1_OUTID2_ORIG = 53 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 55.15040728486592 H1_P_Y = 155.68280071759466 H1_P_Z = 42.79532563752962 # Orientation: H1_DX_X = 0.1730583311830145 H1_DX_Y = 0.847810457911919 H1_DX_Z = -0.501266637093785 H1_DY_X = -0.7072288864068383 H1_DY_Y = -0.2472462639789228 H1_DY_Z = -0.6623417450079785 H1_DZ_X = -0.685476561408116 H1_DZ_Y = 0.469134002608655 H1_DZ_Z = 0.5568080201976997 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 10 H2_INID2 = 3 H2_OUTID2 = 8 H2_INID2_ORIG = 106 H2_OUTID2_ORIG = 71 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 48.12014772406526 H2_P_Y = 152.55691344713608 H2_P_Z = 21.382781472468736 # Orientation: H2_DX_X = 0.43905446532788517 H2_DX_Y = 0.7822130815172841 H2_DX_Z = -0.44201116680339325 H2_DY_X = 0.218129445690046 H2_DY_Y = -0.5700485299639979 H2_DY_Z = -0.792126390425711 H2_DZ_X = -0.8715794406699828 H2_DZ_Y = 0.25137097801683694 H2_DZ_Z = -0.42090605841715245 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 52 H3_OUTID2_ORIG = 109 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 68.42755454178452 H3_P_Y = 148.57538910267502 H3_P_Z = 32.18051534857324 # Orientation: H3_DX_X = 0.6384758682020646 H3_DX_Y = 0.41023210585467496 H3_DX_Z = 0.6511975008011248 H3_DY_X = -0.11359013280858221 H3_DY_Y = -0.7866117877781278 H3_DY_Z = 0.6069095295486946 H3_DZ_X = 0.7612134046718637 H3_DZ_Y = -0.46146669939932394 H3_DZ_Z = -0.45563432475324817 ############# END of Description of junction: j1