############# Start of Description of junction: j42 # Number of strands: NUM_STRANDS = 3 LILLEY = HS1HS16HS3 FINGERPRINT = 67:132:161 LOOP_LENGTH_SUM = 20 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2362 S1_NAME_ID3 = 2383 S1_NUM_ID5_ORIG = 2362 S1_NUM_ID3_ORIG = 2383 S1_NAME2_ID5 = 2364 S1_NAME2_ID3 = 2381 S1_NUM2_ID5_ORIG = 2364 S1_NUM2_ID3_ORIG = 2381 S1_SQ2 = AGCAAAAGAUAGCUUGAC S1_SQLEN2 = 18 S1_SQ = AGAGCAAAAGAUAGCUUGACAG S1_SQLEN = 22 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 2416 S2_NAME_ID3 = 2424 S2_NUM_ID5_ORIG = 2416 S2_NUM_ID3_ORIG = 2424 S2_NAME2_ID5 = 2418 S2_NAME2_ID3 = 2422 S2_NUM2_ID5_ORIG = 2418 S2_NUM2_ID3_ORIG = 2422 S2_SQ2 = GUGGU S2_SQLEN2 = 5 S2_SQ = GCGUGGUCU S2_SQLEN = 9 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 2405 S3_NAME_ID3 = 2411 S3_NUM_ID5_ORIG = 2405 S3_NUM_ID3_ORIG = 2411 S3_NAME2_ID5 = 2407 S3_NAME2_ID3 = 2409 S3_NUM2_ID5_ORIG = 2407 S3_NUM2_ID3_ORIG = 2409 S3_SQ2 = GAC S3_SQLEN2 = 3 S3_SQ = CUGACGC S3_SQLEN = 7 S3_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 9 H1_INID2 = 3 H1_OUTID2 = 7 H1_INID2_ORIG = 2364 H1_OUTID2_ORIG = 2422 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 76.87715911305379 H1_P_Y = 63.475521789698384 H1_P_Z = 90.86362532331094 # Orientation: H1_DX_X = -0.9518556406931964 H1_DX_Y = -0.020009361727453268 H1_DX_Z = -0.3058928974719777 H1_DY_X = -0.23345822637186586 H1_DY_Y = 0.6940121568009872 H1_DY_Z = 0.6810612180646842 H1_DZ_X = 0.1986657892538375 H1_DZ_Y = 0.7196851753758082 H1_DZ_Z = -0.6652707362603962 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 22 H2_INID2 = 3 H2_OUTID2 = 20 H2_INID2_ORIG = 2407 H2_OUTID2_ORIG = 2381 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 66.61028420422095 H2_P_Y = 55.018450180456185 H2_P_Z = 70.69003707359192 # Orientation: H2_DX_X = 0.34962365503669446 H2_DX_Y = 0.3962259324604034 H2_DX_Z = -0.8489807478881204 H2_DY_X = -0.8095318247118826 H2_DY_Y = -0.3283896467520435 H2_DY_Z = -0.4866399744007168 H2_DZ_X = -0.47161586552769563 H2_DZ_Y = 0.8574177805200662 H2_DZ_Z = 0.20594471352917765 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 7 H3_INID2 = 3 H3_OUTID2 = 5 H3_INID2_ORIG = 2418 H3_OUTID2_ORIG = 2409 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 71.77912599408057 H3_P_Y = 35.347371361678455 H3_P_Z = 71.15427087889792 # Orientation: H3_DX_X = 0.8373051120378534 H3_DX_Y = 0.3001604967645193 H3_DX_Z = 0.45697245599417613 H3_DY_X = -0.4546209033187978 H3_DY_Y = -0.08205955260643805 H3_DY_Z = 0.8868968734253286 H3_DZ_X = 0.3037103613986005 H3_DZ_Y = -0.9503525167053013 H3_DZ_Z = 0.0677503532907906 ############# END of Description of junction: j42