############# Start of Description of junction: j59 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS1HS6HS2 FINGERPRINT = 20:47:63:148:148:158 LOOP_LENGTH_SUM = 9 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1945 S1_NAME_ID3 = 1948 S1_NUM_ID5_ORIG = 1945 S1_NUM_ID3_ORIG = 1948 S1_NAME2_ID5 = 1946 S1_NAME2_ID3 = 1947 S1_NUM2_ID5_ORIG = 1946 S1_NUM2_ID3_ORIG = 1947 S1_SQ2 = CG S1_SQLEN2 = 2 S1_SQ = GCGG S1_SQLEN = 4 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 1888 S2_NAME_ID3 = 1892 S2_NUM_ID5_ORIG = 1888 S2_NUM_ID3_ORIG = 1892 S2_NAME2_ID5 = 1889 S2_NAME2_ID3 = 1891 S2_NUM2_ID5_ORIG = 1889 S2_NUM2_ID3_ORIG = 1891 S2_SQ2 = CUG S2_SQLEN2 = 3 S2_SQ = CCUGC S2_SQLEN = 5 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 1964 S3_NAME_ID3 = 1973 S3_NUM_ID5_ORIG = 1964 S3_NUM_ID3_ORIG = 1973 S3_NAME2_ID5 = 1965 S3_NAME2_ID3 = 1972 S3_NUM2_ID5_ORIG = 1965 S3_NUM2_ID3_ORIG = 1972 S3_SQ2 = CUUAAGGU S3_SQLEN2 = 8 S3_SQ = UCUUAAGGUA S3_SQLEN = 10 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 2009 S4_NAME_ID3 = 2014 S4_NUM_ID5_ORIG = 2009 S4_NUM_ID3_ORIG = 2014 S4_NAME2_ID5 = 2010 S4_NAME2_ID3 = 2013 S4_NUM2_ID5_ORIG = 2010 S4_NUM2_ID3_ORIG = 2013 S4_SQ2 = AAUG S4_SQLEN2 = 4 S4_SQ = GAAUGG S4_SQLEN = 6 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 5 H1_INID2 = 2 H1_OUTID2 = 4 H1_INID2_ORIG = 1946 H1_OUTID2_ORIG = 1891 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 115.24324125078218 H1_P_Y = 113.29359612778983 H1_P_Z = 89.64253451370145 # Orientation: H1_DX_X = 0.718455861872755 H1_DX_Y = -0.49483687908241336 H1_DX_Z = 0.4888329342839626 H1_DY_X = -0.5564449372613751 H1_DY_Y = -0.8305677175889485 H1_DY_Z = -0.02294119210668555 H1_DZ_X = 0.41736100241503493 H1_DZ_Y = -0.25552637750153906 H1_DZ_Z = -0.8720757215196784 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 4 H2_INID2 = 2 H2_OUTID2 = 3 H2_INID2_ORIG = 1965 H2_OUTID2_ORIG = 1947 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 117.79278196919351 H2_P_Y = 98.90656690864499 H2_P_Z = 104.53875847803386 # Orientation: H2_DX_X = -0.9833513853103995 H2_DX_Y = -0.14935111619080033 H2_DX_Z = 0.10350988890286317 H2_DY_X = 0.15649953854406817 H2_DY_Y = -0.9855545146222795 H2_DY_Z = 0.06473170122237093 H2_DZ_X = 0.09234688648577105 H2_DZ_Y = 0.07985325791857179 H2_DZ_Z = 0.9925197780176376 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 10 H3_INID2 = 2 H3_OUTID2 = 9 H3_INID2_ORIG = 2010 H3_OUTID2_ORIG = 1972 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 113.39466278776581 H3_P_Y = 112.18266957396827 H3_P_Z = 105.8769365840864 # Orientation: H3_DX_X = 0.8619460624934021 H3_DX_Y = 0.48548674448819895 H3_DX_Z = -0.14612188843010188 H3_DY_X = -0.5031133916949813 H3_DY_Y = 0.783426450666596 H3_DY_Z = -0.3648560147416049 H3_DZ_X = -0.06265700638634542 H3_DZ_Y = 0.3880020841724985 H3_DZ_Z = 0.9195262270476547 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 2 H4_OUTID2 = 5 H4_INID2_ORIG = 1889 H4_OUTID2_ORIG = 2013 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 114.26667889880807 H4_P_Y = 129.2057001082316 H4_P_Z = 93.76014599913081 # Orientation: H4_DX_X = -0.2753429788864139 H4_DX_Y = -0.8376027204665206 H4_DX_Z = 0.4718134447481077 H4_DY_X = 0.6386720664613819 H4_DY_Y = 0.20744310670573896 H4_DY_Z = 0.74098943919752 H4_DZ_X = -0.7185292168728665 H4_DZ_Y = 0.5053603072535395 H4_DZ_Z = 0.477835457404197 ############# END of Description of junction: j59