############# Start of Description of junction: j13 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS1HS6HS8 FINGERPRINT = 53:67:113:137:138:156 LOOP_LENGTH_SUM = 15 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 484 S1_NAME_ID3 = 495 S1_NUM_ID5_ORIG = 484 S1_NUM_ID3_ORIG = 495 S1_NAME2_ID5 = 485 S1_NAME2_ID3 = 494 S1_NUM2_ID5_ORIG = 485 S1_NUM2_ID3_ORIG = 494 S1_SQ2 = GUGAAAAGAA S1_SQLEN2 = 10 S1_SQ = GGUGAAAAGAAC S1_SQLEN = 12 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 29 S2_NAME_ID3 = 32 S2_NUM_ID5_ORIG = 29 S2_NUM_ID3_ORIG = 32 S2_NAME2_ID5 = 30 S2_NAME2_ID3 = 31 S2_NUM2_ID5_ORIG = 30 S2_NUM2_ID3_ORIG = 31 S2_SQ2 = GC S2_SQLEN2 = 2 S2_SQ = UGCC S2_SQLEN = 4 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 506 S3_NAME_ID3 = 510 S3_NUM_ID5_ORIG = 506 S3_NUM_ID3_ORIG = 510 S3_NAME2_ID5 = 507 S3_NAME2_ID3 = 509 S3_NUM2_ID5_ORIG = 507 S3_NUM2_ID3_ORIG = 509 S3_SQ2 = AGU S3_SQLEN2 = 3 S3_SQ = GAGUG S3_SQLEN = 5 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 512 S4_NAME_ID3 = 521 S4_NUM_ID5_ORIG = 512 S4_NUM_ID3_ORIG = 521 S4_NAME2_ID5 = 513 S4_NAME2_ID3 = 520 S4_NUM2_ID5_ORIG = 513 S4_NUM2_ID3_ORIG = 520 S4_SQ2 = AGAGAACC S4_SQLEN2 = 8 S4_SQ = AAGAGAACCU S4_SQLEN = 10 S4_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 4 H1_INID2 = 2 H1_OUTID2 = 3 H1_INID2_ORIG = 485 H1_OUTID2_ORIG = 31 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 211.13904213168425 H1_P_Y = 36.49515476922029 H1_P_Z = 98.0437156184531 # Orientation: H1_DX_X = 0.8917931195944959 H1_DX_Y = -0.4360672834425827 H1_DX_Z = 0.12062485711882687 H1_DY_X = -0.2796917649065449 H1_DY_Y = -0.3217722423209963 H1_DY_Z = 0.9045635083923997 H1_DZ_X = -0.3556368210511778 H1_DZ_Y = -0.8404212921997711 H1_DZ_Z = -0.40891869990241503 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 12 H2_INID2 = 2 H2_OUTID2 = 11 H2_INID2_ORIG = 507 H2_OUTID2_ORIG = 494 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 221.9744417044494 H2_P_Y = 55.07647476821044 H2_P_Z = 126.2540742560735 # Orientation: H2_DX_X = 0.6379947034788245 H2_DX_Y = -0.11432365532327537 H2_DX_Z = 0.7615069665909004 H2_DY_X = 0.4137601637754642 H2_DY_Y = 0.8849253149254324 H2_DY_Z = -0.2137983018563432 H2_DZ_X = -0.6494345888582416 H2_DZ_Y = 0.45148343140989766 H2_DZ_Z = 0.6118802382467408 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 5 H3_INID2 = 2 H3_OUTID2 = 4 H3_INID2_ORIG = 513 H3_OUTID2_ORIG = 509 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 238.6173582061982 H3_P_Y = 49.19923956575086 H3_P_Z = 113.25114113178405 # Orientation: H3_DX_X = -0.5584687277175817 H3_DX_Y = -0.6377360357245436 H3_DX_Z = 0.5304766054218106 H3_DY_X = -0.635031828332302 H3_DY_Y = -0.08276398920959593 H3_DY_Z = -0.7680395166233609 H3_DZ_X = 0.5337108366582584 H3_DZ_Y = -0.7657955803140055 H3_DZ_Z = -0.3587615810048277 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 10 H4_INID2 = 2 H4_OUTID2 = 9 H4_INID2_ORIG = 30 H4_OUTID2_ORIG = 520 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 211.66988663798446 H4_P_Y = 48.52697297488876 H4_P_Z = 101.62726345974083 # Orientation: H4_DX_X = 0.9632423935122745 H4_DX_Y = 0.013187700453670459 H4_DX_Z = -0.2683098505413426 H4_DY_X = -0.2622376130238422 H4_DY_Y = -0.1704937809648328 H4_DY_Z = -0.9498227755575783 H4_DZ_X = -0.058271139137019645 H4_DZ_Y = 0.9852704984972718 H4_DZ_Z = -0.16076852656728136 ############# END of Description of junction: j13