#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS1HS2
FINGERPRINT = 87
LOOP_LENGTH_SUM = 3
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  4
S1_NAME_ID3 = 11
S1_NUM_ID5_ORIG =  4
S1_NUM_ID3_ORIG = 11
S1_NAME2_ID5 =  6
S1_NAME2_ID3 = 9
S1_NUM2_ID5_ORIG =  6
S1_NUM2_ID3_ORIG = 9
S1_SQ2 = UUGA
S1_SQLEN2 = 4
S1_SQ = ACUUGAAA
S1_SQLEN = 8
S1_CHAR = D
## Properties of strand 2
S2_NAME_ID5 =  20
S2_NAME_ID3 = 26
S2_NUM_ID5_ORIG =  20
S2_NUM_ID3_ORIG = 26
S2_NAME2_ID5 =  22
S2_NAME2_ID3 = 24
S2_NUM2_ID5_ORIG =  22
S2_NUM2_ID3_ORIG = 24
S2_SQ2 = GGC
S2_SQLEN2 = 3
S2_SQ = UUGGCGU
S2_SQLEN = 7
S2_CHAR = D
## Properties of helix 1
H1_INID = 1
H1_OUTID = 7
H1_INID2 = 3
H1_OUTID2 = 5
H1_INID2_ORIG = 6
H1_OUTID2_ORIG = 24
H1_INSEQ_CHAR = D
H1_OUTSEQ_CHAR = D
# Position:
H1_P_X = 21.643895123805912
H1_P_Y = 4.469592468956664
H1_P_Z = 40.928461725210894
# Orientation:
H1_DX_X = -0.7707409636043003
H1_DX_Y = 0.5903631319846028
H1_DX_Z = 0.23964502793849363
H1_DY_X = -0.6248073822479974
H1_DY_Y = -0.7739828413879821
H1_DY_Z = -0.10279249158080717
H1_DZ_X = 0.12479624237419529
H1_DZ_Y = -0.22895836658727564
H1_DZ_Z = 0.9654035240555956
## Properties of helix 2
H2_INID = 1
H2_OUTID = 8
H2_INID2 = 3
H2_OUTID2 = 6
H2_INID2_ORIG = 22
H2_OUTID2_ORIG = 9
H2_INSEQ_CHAR = D
H2_OUTSEQ_CHAR = D
# Position:
H2_P_X = 29.940083470335324
H2_P_Y = 24.797450415581586
H2_P_Z = 26.349276444818642
# Orientation:
H2_DX_X = 0.49827019962729935
H2_DX_Y = -0.5159239185338294
H2_DX_Z = 0.6968136899114974
H2_DY_X = 0.631838610514766
H2_DY_Y = -0.33428066789616295
H2_DY_Z = -0.6993113793823618
H2_DZ_X = 0.5937228127890499
H2_DZ_Y = 0.7887198142278358
H2_DZ_Z = 0.15941855669358063
#############  END of Description of junction: j1