############# Start of Description of junction: j84 # Number of strands: NUM_STRANDS = 6 LILLEY = 2HS2HS6HS9HS2HS2 FINGERPRINT = 7:26:38:60:61:61:97:108:114:140:146:148:154:166:172 LOOP_LENGTH_SUM = 21 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2221 S1_NAME_ID3 = 2226 S1_NUM_ID5_ORIG = 2221 S1_NUM_ID3_ORIG = 2226 S1_NAME2_ID5 = 2222 S1_NAME2_ID3 = 2225 S1_NUM2_ID5_ORIG = 2222 S1_NUM2_ID3_ORIG = 2225 S1_SQ2 = UUUG S1_SQLEN2 = 4 S1_SQ = GUUUGA S1_SQLEN = 6 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 2056 S2_NAME_ID3 = 2061 S2_NUM_ID5_ORIG = 2056 S2_NUM_ID3_ORIG = 2061 S2_NAME2_ID5 = 2057 S2_NAME2_ID3 = 2060 S2_NUM2_ID5_ORIG = 2057 S2_NUM2_ID3_ORIG = 2060 S2_SQ2 = UUUA S2_SQLEN2 = 4 S2_SQ = CUUUAC S2_SQLEN = 6 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 2236 S3_NAME_ID3 = 2239 S3_NUM_ID5_ORIG = 2236 S3_NUM_ID3_ORIG = 2239 S3_NAME2_ID5 = 2237 S3_NAME2_ID3 = 2238 S3_NUM2_ID5_ORIG = 2237 S3_NUM2_ID3_ORIG = 2238 S3_SQ2 = CG S3_SQLEN2 = 2 S3_SQ = UCGC S3_SQLEN = 4 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 2259 S4_NAME_ID3 = 2264 S4_NUM_ID5_ORIG = 2259 S4_NUM_ID3_ORIG = 2264 S4_NAME2_ID5 = 2260 S4_NAME2_ID3 = 2263 S4_NUM2_ID5_ORIG = 2260 S4_NUM2_ID3_ORIG = 2263 S4_SQ2 = CGCC S4_SQLEN2 = 4 S4_SQ = GCGCCC S4_SQLEN = 6 S4_CHAR = 0 ## Properties of strand 5 S5_NAME_ID5 = 2362 S5_NAME_ID3 = 2371 S5_NUM_ID5_ORIG = 2362 S5_NUM_ID3_ORIG = 2371 S5_NAME2_ID5 = 2363 S5_NAME2_ID3 = 2370 S5_NUM2_ID5_ORIG = 2363 S5_NUM2_ID3_ORIG = 2370 S5_SQ2 = GCUUAGUG S5_SQLEN2 = 8 S5_SQ = GGCUUAGUGA S5_SQLEN = 10 S5_CHAR = 0 ## Properties of strand 6 S6_NAME_ID5 = 2403 S6_NAME_ID3 = 2415 S6_NUM_ID5_ORIG = 2403 S6_NUM_ID3_ORIG = 2415 S6_NAME2_ID5 = 2404 S6_NAME2_ID3 = 2414 S6_NUM2_ID5_ORIG = 2404 S6_NUM2_ID3_ORIG = 2414 S6_SQ2 = AACGGAUAAAA S6_SQLEN2 = 11 S6_SQ = CAACGGAUAAAAG S6_SQLEN = 13 S6_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 2 H1_OUTID2 = 5 H1_INID2_ORIG = 2222 H1_OUTID2_ORIG = 2060 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 56.51527506050439 H1_P_Y = 157.22564332692963 H1_P_Z = 100.2742270601403 # Orientation: H1_DX_X = 0.28296986877035835 H1_DX_Y = -0.13814673191859583 H1_DX_Z = -0.9491277752907195 H1_DY_X = -0.9495620873389186 H1_DY_Y = 0.09906772935531194 H1_DY_Z = -0.2975187847664955 H1_DZ_X = 0.13512918136597563 H1_DZ_Y = 0.985444602938486 H1_DZ_Z = -0.10314571674462059 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 2 H2_OUTID2 = 5 H2_INID2_ORIG = 2237 H2_OUTID2_ORIG = 2225 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 64.73306242030397 H2_P_Y = 133.57322733609888 H2_P_Z = 90.34217131703761 # Orientation: H2_DX_X = -0.9290337882938857 H2_DX_Y = 0.007687706822736118 H2_DX_Z = -0.3699150164188296 H2_DY_X = 0.27628740350242253 H2_DY_Y = -0.6505658599561457 H2_DY_Z = -0.7074102999854119 H2_DZ_X = -0.246092443756865 H2_DZ_Y = -0.7594109302764593 H2_DZ_Z = 0.6022736488527585 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 4 H3_INID2 = 2 H3_OUTID2 = 3 H3_INID2_ORIG = 2260 H3_OUTID2_ORIG = 2238 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 70.77280001117049 H3_P_Y = 127.19807586683157 H3_P_Z = 73.16356120614144 # Orientation: H3_DX_X = -0.6387573219794689 H3_DX_Y = 0.5680753272016688 H3_DX_Z = -0.5189214836970137 H3_DY_X = 0.6521512929991502 H3_DY_Y = 0.041856985230495525 H3_DY_Z = -0.7569324169481462 H3_DZ_X = -0.40827414154848896 H3_DZ_Y = -0.8219114401272805 H3_DZ_Z = -0.39720751494745343 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 2 H4_OUTID2 = 5 H4_INID2_ORIG = 2363 H4_OUTID2_ORIG = 2263 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 72.43790629629682 H4_P_Y = 147.75015241851784 H4_P_Z = 56.11073209790427 # Orientation: H4_DX_X = 0.9758388417886437 H4_DX_Y = -0.16443067885626306 H4_DX_Z = -0.14387879172223705 H4_DY_X = -0.17513886534955247 H4_DY_Y = -0.1949600873383588 H4_DY_Z = -0.965047637264135 H4_DZ_X = 0.13063281632366852 H4_DZ_Y = 0.9669297369487992 H4_DZ_Z = -0.2190478283468167 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 10 H5_INID2 = 2 H5_OUTID2 = 9 H5_INID2_ORIG = 2404 H5_OUTID2_ORIG = 2370 H5_INSEQ_CHAR = 0 H5_OUTSEQ_CHAR = 0 # Position: H5_P_X = 61.250733549241666 H5_P_Y = 151.08089243706496 H5_P_Z = 68.5832909080546 # Orientation: H5_DX_X = -0.5661639886658918 H5_DX_Y = -0.7905248293077136 H5_DX_Z = -0.2335140941912357 H5_DY_X = -0.21026051591150718 H5_DY_Y = -0.13541811607927912 H5_DY_Z = 0.9682212811574402 H5_DZ_X = -0.7970250017324148 H5_DZ_Y = 0.5972708163685638 H5_DZ_Z = -0.08954729771403436 ## Properties of helix 6 H6_INID = 1 H6_OUTID = 13 H6_INID2 = 2 H6_OUTID2 = 12 H6_INID2_ORIG = 2057 H6_OUTID2_ORIG = 2414 H6_INSEQ_CHAR = 0 H6_OUTSEQ_CHAR = 0 # Position: H6_P_X = 53.37809963766562 H6_P_Y = 146.28506329356014 H6_P_Z = 100.04938122438476 # Orientation: H6_DX_X = 0.9693976626247292 H6_DX_Y = -0.21492737018522234 H6_DX_Z = -0.11863556483186244 H6_DY_X = 0.11360025039638799 H6_DY_Y = -0.035676005880588946 H6_DY_Z = 0.992885796914365 H6_DZ_X = -0.21763077633364247 H6_DZ_Y = -0.9759782006528894 H6_DZ_Z = -0.010168433642377295 ############# END of Description of junction: j84