#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = HS6HS12HS12HS16
FINGERPRINT = 9:73:78:78:86:138
LOOP_LENGTH_SUM = 46
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  446
S1_NAME_ID3 = 467
S1_NUM_ID5_ORIG =  446
S1_NUM_ID3_ORIG = 467
S1_NAME2_ID5 =  448
S1_NAME2_ID3 = 465
S1_NUM2_ID5_ORIG =  448
S1_NUM2_ID3_ORIG = 465
S1_SQ2 = GACCGAUAGUGAACAAGU
S1_SQLEN2 = 18
S1_SQ = GAGACCGAUAGUGAACAAGUAG
S1_SQLEN = 22
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  25
S2_NAME_ID3 = 36
S2_NUM_ID5_ORIG =  25
S2_NUM_ID3_ORIG = 36
S2_NAME2_ID5 =  27
S2_NAME2_ID3 = 34
S2_NUM2_ID5_ORIG =  27
S2_NUM2_ID3_ORIG = 34
S2_SQ2 = UGCUCGGC
S2_SQLEN2 = 8
S2_SQ = AUUGCUCGGCUC
S2_SQLEN = 12
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  474
S3_NAME_ID3 = 491
S3_NUM_ID5_ORIG =  474
S3_NUM_ID3_ORIG = 491
S3_NAME2_ID5 =  476
S3_NAME2_ID3 = 489
S3_NUM2_ID5_ORIG =  476
S3_NUM2_ID3_ORIG = 489
S3_SQ2 = AACGCUGCAAAGUA
S3_SQLEN2 = 14
S3_SQ = CGAACGCUGCAAAGUACC
S3_SQLEN = 18
S3_CHAR = A
## Properties of strand 4
S4_NAME_ID5 =  501
S4_NAME_ID3 = 518
S4_NUM_ID5_ORIG =  501
S4_NUM_ID3_ORIG = 518
S4_NAME2_ID5 =  503
S4_NAME2_ID3 = 516
S4_NUM2_ID5_ORIG =  503
S4_NUM2_ID3_ORIG = 516
S4_SQ2 = GGCGAAAUAGAGCA
S4_SQLEN2 = 14
S4_SQ = GAGGCGAAAUAGAGCAUG
S4_SQLEN = 18
S4_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 12
H1_INID2 = 3
H1_OUTID2 = 10
H1_INID2_ORIG = 448
H1_OUTID2_ORIG = 34
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 45.69153028017846
H1_P_Y = 126.98693317136728
H1_P_Z = 37.01505058430387
# Orientation:
H1_DX_X = -0.18578172259397263
H1_DX_Y = -0.9389312104879366
H1_DX_Z = 0.2896434593110371
H1_DY_X = -0.5801609626316093
H1_DY_Y = -0.13308871607054584
H1_DY_Z = -0.8035550081314042
H1_DZ_X = 0.7930311525963987
H1_DZ_Y = -0.3173256617835136
H1_DZ_Z = -0.5200057839921541
## Properties of helix 2
H2_INID = 1
H2_OUTID = 22
H2_INID2 = 3
H2_OUTID2 = 20
H2_INID2_ORIG = 476
H2_OUTID2_ORIG = 465
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 63.25589028589701
H2_P_Y = 143.92496920229053
H2_P_Z = 55.90444894366157
# Orientation:
H2_DX_X = -0.6439938056363914
H2_DX_Y = 0.4289633301357867
H2_DX_Z = 0.6334527920064588
H2_DY_X = 0.24792669865166772
H2_DY_Y = -0.6663013620563731
H2_DY_Z = 0.7032601560002405
H2_DZ_X = 0.7237432765819918
H2_DZ_Y = 0.6099450436888958
H2_DZ_Z = 0.3227424875682203
## Properties of helix 3
H3_INID = 1
H3_OUTID = 18
H3_INID2 = 3
H3_OUTID2 = 16
H3_INID2_ORIG = 503
H3_OUTID2_ORIG = 489
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 25.513846618088728
H3_P_Y = 171.2656345956884
H3_P_Z = 66.27664679814629
# Orientation:
H3_DX_X = -0.7080845938907956
H3_DX_Y = 0.6864064282992786
H3_DX_Z = -0.16571790212265114
H3_DY_X = -0.3664716766481746
H3_DY_Y = -0.15661906904625766
H3_DY_Z = 0.917152646741954
H3_DZ_X = 0.603584888900631
H3_DZ_Y = 0.710152576845644
H3_DZ_Z = 0.3624480645420931
## Properties of helix 4
H4_INID = 1
H4_OUTID = 18
H4_INID2 = 3
H4_OUTID2 = 16
H4_INID2_ORIG = 27
H4_OUTID2_ORIG = 516
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = A
# Position:
H4_P_X = 27.622626484769555
H4_P_Y = 141.6560855265639
H4_P_Z = 69.02180866804743
# Orientation:
H4_DX_X = -0.7568343867344716
H4_DX_Y = -0.6435776346706064
H4_DX_Z = -0.11405936703333452
H4_DY_X = 0.6019175561678836
H4_DY_Y = -0.7543029420931759
H4_DY_Z = 0.2621494366319581
H4_DZ_X = -0.25474883048437036
H4_DZ_Y = 0.12974937264337427
H4_DZ_Z = 0.9582630816563409
#############  END of Description of junction: j1