############# Start of Description of junction: j9 # Number of strands: NUM_STRANDS = 3 LILLEY = HS1HS3HS2 FINGERPRINT = 18:151:169 LOOP_LENGTH_SUM = 6 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 822 S1_NAME_ID3 = 829 S1_NUM_ID5_ORIG = 822 S1_NUM_ID3_ORIG = 829 S1_NAME2_ID5 = 824 S1_NAME2_ID3 = 827 S1_NUM2_ID5_ORIG = 824 S1_NUM2_ID3_ORIG = 827 S1_SQ2 = GUUA S1_SQLEN2 = 4 S1_SQ = CUGUUAGA S1_SQLEN = 8 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 786 S2_NAME_ID3 = 792 S2_NUM_ID5_ORIG = 786 S2_NUM_ID3_ORIG = 792 S2_NAME2_ID5 = 788 S2_NAME2_ID3 = 790 S2_NUM2_ID5_ORIG = 788 S2_NUM2_ID3_ORIG = 790 S2_SQ2 = ACA S2_SQLEN2 = 3 S2_SQ = GGACAAG S2_SQLEN = 7 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 852 S3_NAME_ID3 = 860 S3_NUM_ID5_ORIG = 852 S3_NUM_ID3_ORIG = 860 S3_NAME2_ID5 = 854 S3_NAME2_ID3 = 858 S3_NUM2_ID5_ORIG = 854 S3_NUM2_ID3_ORIG = 858 S3_SQ2 = GUGAU S3_SQLEN2 = 5 S3_SQ = UCGUGAUCU S3_SQLEN = 9 S3_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 824 H1_OUTID2_ORIG = 790 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 107.23053348444489 H1_P_Y = 162.16189694495563 H1_P_Z = 87.83713490649092 # Orientation: H1_DX_X = -0.2705647790594554 H1_DX_Y = 0.7068256086547251 H1_DX_Z = 0.6535994639550893 H1_DY_X = 0.21162493962941653 H1_DY_Y = -0.6186469597413407 H1_DY_Z = 0.7566312339109658 H1_DZ_X = 0.9391536537006857 H1_DZ_Y = 0.3430357097339254 H1_DZ_Z = 0.017802151218134554 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 854 H2_OUTID2_ORIG = 827 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 87.41075463297393 H2_P_Y = 156.53606566983277 H2_P_Z = 89.97129225461454 # Orientation: H2_DX_X = 0.31553146975518587 H2_DX_Y = -0.29280932941591686 H2_DX_Z = -0.9026087680723691 H2_DY_X = 0.37756568743549224 H2_DY_Y = -0.8339217621543185 H2_DY_Z = 0.40251539880706844 H2_DZ_X = -0.8705653584111275 H2_DZ_Y = -0.46780037538724173 H2_DZ_Z = -0.15257380352493044 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 9 H3_INID2 = 3 H3_OUTID2 = 7 H3_INID2_ORIG = 788 H3_OUTID2_ORIG = 858 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 96.58678616994206 H3_P_Y = 152.17890998110855 H3_P_Z = 69.51028278468871 # Orientation: H3_DX_X = -0.6624923427553426 H3_DX_Y = 0.36481080963966406 H3_DX_Z = 0.6542300581298548 H3_DY_X = -0.29275176933863634 H3_DY_Y = 0.6778305761137347 H3_DY_Z = -0.674419833363757 H3_DZ_X = -0.6894927826595705 H3_DZ_Y = -0.6383249824778545 H3_DZ_Z = -0.3422585563649392 ############# END of Description of junction: j9