############# Start of Description of junction: j1 # Number of strands: NUM_STRANDS = 3 LILLEY = 2HS2HS4 FINGERPRINT = 60:130:169 LOOP_LENGTH_SUM = 6 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 64 S1_NAME_ID3 = 73 S1_NUM_ID5_ORIG = 64 S1_NUM_ID3_ORIG = 73 S1_NAME2_ID5 = 66 S1_NAME2_ID3 = 71 S1_NUM2_ID5_ORIG = 66 S1_NUM2_ID3_ORIG = 71 S1_SQ2 = GAUAAG S1_SQLEN2 = 6 S1_SQ = GCGAUAAGCC S1_SQLEN = 10 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 50 S2_NAME_ID3 = 55 S2_NUM_ID5_ORIG = 50 S2_NUM_ID3_ORIG = 55 S2_NAME2_ID5 = 52 S2_NAME2_ID3 = 53 S2_NUM2_ID5_ORIG = 52 S2_NUM2_ID3_ORIG = 53 S2_SQ2 = AC S2_SQLEN2 = 2 S2_SQ = GGACGU S2_SQLEN = 6 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 104 S3_NAME_ID3 = 111 S3_NUM_ID5_ORIG = 104 S3_NUM_ID3_ORIG = 111 S3_NAME2_ID5 = 106 S3_NAME2_ID3 = 109 S3_NUM2_ID5_ORIG = 106 S3_NUM2_ID3_ORIG = 109 S3_SQ2 = AUUU S3_SQLEN2 = 4 S3_SQ = GGAUUUCC S3_SQLEN = 8 S3_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 66 H1_OUTID2_ORIG = 53 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 54.58159639014004 H1_P_Y = 156.16909840542849 H1_P_Z = 42.31008224141835 # Orientation: H1_DX_X = 0.21233006498948725 H1_DX_Y = 0.8309579713260575 H1_DX_Z = -0.5142225135009753 H1_DY_X = -0.7167087461111095 H1_DY_Y = -0.2252810583505891 H1_DY_Z = -0.659982589161487 H1_DZ_X = -0.6642623854693426 H1_DZ_Y = 0.5086819189219796 H1_DZ_Z = 0.5477209039396342 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 10 H2_INID2 = 3 H2_OUTID2 = 8 H2_INID2_ORIG = 106 H2_OUTID2_ORIG = 71 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 47.53033766347663 H2_P_Y = 153.12208726955726 H2_P_Z = 20.85584179774837 # Orientation: H2_DX_X = 0.4383568134097615 H2_DX_Y = 0.7708822896254901 H2_DX_Z = -0.4621512735879776 H2_DY_X = 0.19230909640955218 H2_DY_Y = -0.5827219389152845 H2_DY_Z = -0.7895899906565091 H2_DZ_X = -0.8779866260800233 H2_DZ_Y = 0.25724625837619897 H2_DZ_Z = -0.4036878088028608 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 52 H3_OUTID2_ORIG = 109 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 68.24955660160808 H3_P_Y = 148.64494212686427 H3_P_Z = 31.69934983323312 # Orientation: H3_DX_X = 0.5976440458329364 H3_DX_Y = 0.43590987832814676 H3_DX_Z = 0.6729072539781313 H3_DY_X = -0.12889825910825436 H3_DY_Y = -0.7761295222775288 H3_DY_Z = 0.6172586195818823 H3_DZ_X = 0.7913323153260592 H3_DZ_Y = -0.45563751231125593 H3_DZ_Z = -0.407661163339732 ############# END of Description of junction: j1