############# Start of Description of junction: j1 # Number of strands: NUM_STRANDS = 3 LILLEY = 2HS2HS4 FINGERPRINT = 62:126:171 LOOP_LENGTH_SUM = 6 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 64 S1_NAME_ID3 = 73 S1_NUM_ID5_ORIG = 64 S1_NUM_ID3_ORIG = 73 S1_NAME2_ID5 = 66 S1_NAME2_ID3 = 71 S1_NUM2_ID5_ORIG = 66 S1_NUM2_ID3_ORIG = 71 S1_SQ2 = GAUAAG S1_SQLEN2 = 6 S1_SQ = GCGAUAAGCC S1_SQLEN = 10 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 50 S2_NAME_ID3 = 55 S2_NUM_ID5_ORIG = 50 S2_NUM_ID3_ORIG = 55 S2_NAME2_ID5 = 52 S2_NAME2_ID3 = 53 S2_NUM2_ID5_ORIG = 52 S2_NUM2_ID3_ORIG = 53 S2_SQ2 = AC S2_SQLEN2 = 2 S2_SQ = GGACGU S2_SQLEN = 6 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 104 S3_NAME_ID3 = 111 S3_NUM_ID5_ORIG = 104 S3_NUM_ID3_ORIG = 111 S3_NAME2_ID5 = 106 S3_NAME2_ID3 = 109 S3_NUM2_ID5_ORIG = 106 S3_NUM2_ID3_ORIG = 109 S3_SQ2 = AUUU S3_SQLEN2 = 4 S3_SQ = GGAUUUCC S3_SQLEN = 8 S3_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 66 H1_OUTID2_ORIG = 53 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 54.89873948647916 H1_P_Y = 156.47059741889805 H1_P_Z = 42.437227973280436 # Orientation: H1_DX_X = 0.18433422393485444 H1_DX_Y = 0.8360374852089478 H1_DX_Z = -0.5167806277443532 H1_DY_X = -0.7238296327204097 H1_DY_Y = -0.2402201107965709 H1_DY_Z = -0.6468113798973576 H1_DZ_X = -0.6648996591081797 H1_DZ_Y = 0.49329060572281946 H1_DZ_Z = 0.5608679181620531 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 10 H2_INID2 = 3 H2_OUTID2 = 8 H2_INID2_ORIG = 106 H2_OUTID2_ORIG = 71 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 47.60364784074996 H2_P_Y = 153.5173081917637 H2_P_Z = 20.93362054332166 # Orientation: H2_DX_X = 0.43889054572837694 H2_DX_Y = 0.7653097489186109 H2_DX_Z = -0.4708248900391254 H2_DY_X = 0.19726378826256052 H2_DY_Y = -0.5932716545879373 H2_DY_Z = -0.7804586739237251 H2_DZ_X = -0.8766196933166341 H2_DZ_Y = 0.24965923189941464 H2_DZ_Z = -0.41134922051324097 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 52 H3_OUTID2_ORIG = 109 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 68.13809279611161 H3_P_Y = 149.2101364311301 H3_P_Z = 31.760595041054277 # Orientation: H3_DX_X = 0.6320565518976764 H3_DX_Y = 0.41830612975942927 H3_DX_Z = 0.6523223873276898 H3_DY_X = -0.09288881735818677 H3_DY_Y = -0.7948236841243386 H3_DY_Z = 0.5996890684053078 H3_DZ_X = 0.769334896396245 H3_DZ_Y = -0.43963085988212924 H3_DZ_Z = -0.46351755546719176 ############# END of Description of junction: j1