############# Start of Description of junction: j9 # Number of strands: NUM_STRANDS = 2 LILLEY = HS2HS3 FINGERPRINT = 143 LOOP_LENGTH_SUM = 5 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 638 S1_NAME_ID3 = 646 S1_NUM_ID5_ORIG = 638 S1_NUM_ID3_ORIG = 646 S1_NAME2_ID5 = 640 S1_NAME2_ID3 = 644 S1_NUM2_ID5_ORIG = 640 S1_NUM2_ID3_ORIG = 644 S1_SQ2 = AUACG S1_SQLEN2 = 5 S1_SQ = GGAUACGCU S1_SQLEN = 9 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 593 S2_NAME_ID3 = 600 S2_NUM_ID5_ORIG = 593 S2_NUM_ID3_ORIG = 600 S2_NAME2_ID5 = 595 S2_NAME2_ID3 = 598 S2_NUM2_ID5_ORIG = 595 S2_NUM2_ID3_ORIG = 598 S2_SQ2 = GCGU S2_SQLEN2 = 4 S2_SQ = GGGCGUCC S2_SQLEN = 8 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 640 H1_OUTID2_ORIG = 598 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 115.46507292000251 H1_P_Y = 99.75857723877051 H1_P_Z = -19.333745930529677 # Orientation: H1_DX_X = 0.13114316159659722 H1_DX_Y = 0.9505141236464283 H1_DX_Z = 0.28164582708622987 H1_DY_X = -0.979663353905039 H1_DY_Y = 0.08073646317137673 H1_DY_Z = 0.18368815021685947 H1_DZ_X = 0.15185909318169877 H1_DZ_Y = -0.30000754034392685 H1_DZ_Z = 0.9417718893420108 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 595 H2_OUTID2_ORIG = 644 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 121.8009296823026 H2_P_Y = 111.03693856088883 H2_P_Z = -38.97685799739849 # Orientation: H2_DX_X = 0.1685429291952829 H2_DX_Y = -0.9856574249320147 H2_DX_Z = -0.008527701605245852 H2_DY_X = -0.8844418575767321 H2_DY_Y = -0.14740488120504835 H2_DY_Z = -0.4427577233241067 H2_DZ_X = 0.43515041259833254 H2_DZ_Y = 0.08216593986148268 H2_DZ_Z = -0.8966007342971452 ############# END of Description of junction: j9