############# Start of Description of junction: j9 # Number of strands: NUM_STRANDS = 2 LILLEY = HS2HS4 FINGERPRINT = 62 LOOP_LENGTH_SUM = 6 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 276 S1_NAME_ID3 = 285 S1_NUM_ID5_ORIG = 276 S1_NUM_ID3_ORIG = 285 S1_NAME2_ID5 = 278 S1_NAME2_ID3 = 283 S1_NUM2_ID5_ORIG = 278 S1_NUM2_ID3_ORIG = 283 S1_SQ2 = GACGAC S1_SQLEN2 = 6 S1_SQ = GCGACGACGG S1_SQLEN = 10 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 241 S2_NAME_ID3 = 248 S2_NUM_ID5_ORIG = 241 S2_NUM_ID3_ORIG = 248 S2_NAME2_ID5 = 243 S2_NAME2_ID3 = 246 S2_NUM2_ID5_ORIG = 243 S2_NUM2_ID3_ORIG = 246 S2_SQ2 = AUCA S2_SQLEN2 = 4 S2_SQ = CCAUCAGC S2_SQLEN = 8 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 278 H1_OUTID2_ORIG = 246 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 139.94387096230466 H1_P_Y = 71.46418512094105 H1_P_Z = -43.55716414176133 # Orientation: H1_DX_X = 0.3101121807714833 H1_DX_Y = -0.1540436271916974 H1_DX_Z = 0.9381369816070304 H1_DY_X = -0.9383675141218646 H1_DY_Y = -0.20802272232555197 H1_DY_Z = 0.2760307146623262 H1_DZ_X = 0.1526330363252839 H1_DZ_Y = -0.965917754220257 H1_DZ_Z = -0.20905991558458226 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 10 H2_INID2 = 3 H2_OUTID2 = 8 H2_INID2_ORIG = 243 H2_OUTID2_ORIG = 283 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 142.12670628085445 H2_P_Y = 74.78142427884052 H2_P_Z = -20.735101335650448 # Orientation: H2_DX_X = 0.8158216912109424 H2_DX_Y = -0.47396401943771593 H2_DX_Z = -0.3313503831718876 H2_DY_X = 0.5728159961844881 H2_DY_Y = 0.5835384536373738 H2_DY_Z = 0.5756428646666976 H2_DZ_X = -0.07947831568978359 H2_DZ_Y = -0.6594247352086171 H2_DZ_Z = 0.7475575000828805 ############# END of Description of junction: j9