############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 4 LILLEY = 3HS6HS2 FINGERPRINT = 62:66:109:114:125:172 LOOP_LENGTH_SUM = 8 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 237 S1_NAME_ID3 = 242 S1_NUM_ID5_ORIG = 237 S1_NUM_ID3_ORIG = 242 S1_NAME2_ID5 = 239 S1_NAME2_ID3 = 240 S1_NUM2_ID5_ORIG = 239 S1_NUM2_ID3_ORIG = 240 S1_SQ2 = UC S1_SQLEN2 = 2 S1_SQ = CGUCCC S1_SQLEN = 6 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 113 S2_NAME_ID3 = 124 S2_NUM_ID5_ORIG = 113 S2_NUM_ID3_ORIG = 124 S2_NAME2_ID5 = 115 S2_NAME2_ID3 = 122 S2_NUM2_ID5_ORIG = 115 S2_NUM2_ID3_ORIG = 122 S2_SQ2 = GAGUAACG S2_SQLEN2 = 8 S2_SQ = GUGAGUAACGCG S2_SQLEN = 12 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 284 S3_NAME_ID3 = 291 S3_NUM_ID5_ORIG = 284 S3_NUM_ID3_ORIG = 291 S3_NAME2_ID5 = 286 S3_NAME2_ID3 = 289 S3_NUM2_ID5_ORIG = 286 S3_NUM2_ID3_ORIG = 289 S3_SQ2 = GUAG S3_SQLEN2 = 4 S3_SQ = GGGUAGCC S3_SQLEN = 8 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 309 S4_NAME_ID3 = 314 S4_NUM_ID5_ORIG = 309 S4_NUM_ID3_ORIG = 314 S4_NAME2_ID5 = 311 S4_NAME2_ID3 = 312 S4_NUM2_ID5_ORIG = 311 S4_NUM2_ID3_ORIG = 312 S4_SQ2 = CC S4_SQLEN2 = 2 S4_SQ = GGCCAC S4_SQLEN = 6 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 12 H1_INID2 = 3 H1_OUTID2 = 10 H1_INID2_ORIG = 239 H1_OUTID2_ORIG = 122 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 124.95107216589896 H1_P_Y = 77.65901759515117 H1_P_Z = -17.716967137897406 # Orientation: H1_DX_X = 0.3314108614975453 H1_DX_Y = 0.39154370645105985 H1_DX_Z = 0.8584057122480111 H1_DY_X = -0.1875303152636576 H1_DY_Y = 0.9190065371098655 H1_DY_Z = -0.34678432145417304 H1_DZ_X = -0.9246616796096703 H1_DZ_Y = -0.04604900311503002 H1_DZ_Z = 0.3779950628957387 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 286 H2_OUTID2_ORIG = 240 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 143.34983138451165 H2_P_Y = 80.02010186409014 H2_P_Z = -25.798240540897037 # Orientation: H2_DX_X = 0.9060482988428475 H2_DX_Y = 0.2504078399599763 H2_DX_Z = 0.3411339822570625 H2_DY_X = 0.40945255587283214 H2_DY_Y = -0.7223753947056366 H2_DY_Z = -0.5572453621279223 H2_DZ_X = 0.1068881876222747 H2_DZ_Y = 0.6445693933243035 H2_DZ_Z = -0.757037127581178 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 311 H3_OUTID2_ORIG = 289 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 135.6854856352164 H3_P_Y = 78.83870632379207 H3_P_Z = 0.6945152623632733 # Orientation: H3_DX_X = -0.3968843755022817 H3_DX_Y = 0.3599070193714198 H3_DX_Z = -0.8443635057777722 H3_DY_X = -0.8317196554175723 H3_DY_Y = 0.24808351406947793 H3_DY_Z = 0.49668600225798976 H3_DZ_X = 0.38823344430156226 H3_DZ_Y = 0.8994006378995607 H3_DZ_Z = 0.2008812715800702 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 3 H4_OUTID2 = 4 H4_INID2_ORIG = 115 H4_OUTID2_ORIG = 312 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 128.23520928912365 H4_P_Y = 64.19772260308662 H4_P_Z = -1.2892018124079492 # Orientation: H4_DX_X = 0.6983265574452844 H4_DX_Y = -0.2789968525892519 H4_DX_Z = -0.6591667280832167 H4_DY_X = 0.572632333922769 H4_DY_Y = -0.33477075068307016 H4_DY_Z = 0.7483453444989413 H4_DZ_X = -0.42945573615074295 H4_DZ_Y = -0.9000496101506741 H4_DZ_Z = -0.07401668700257558 ############# END of Description of junction: j4