############# Start of Description of junction: j25 # Number of strands: NUM_STRANDS = 3 LILLEY = HS2HS6HS3 FINGERPRINT = 70:82:146 LOOP_LENGTH_SUM = 11 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1442 S1_NAME_ID3 = 1453 S1_NUM_ID5_ORIG = 1442 S1_NUM_ID3_ORIG = 1453 S1_NAME2_ID5 = 1444 S1_NAME2_ID3 = 1451 S1_NUM2_ID5_ORIG = 1444 S1_NUM2_ID3_ORIG = 1451 S1_SQ2 = GGUUAGCC S1_SQLEN2 = 8 S1_SQ = AGGGUUAGCCGG S1_SQLEN = 12 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 1414 S2_NAME_ID3 = 1422 S2_NUM_ID5_ORIG = 1414 S2_NUM_ID3_ORIG = 1422 S2_NAME2_ID5 = 1416 S2_NAME2_ID3 = 1420 S2_NUM2_ID5_ORIG = 1416 S2_NUM2_ID3_ORIG = 1420 S2_SQ2 = GGUUC S2_SQLEN2 = 5 S2_SQ = AGGGUUCCU S2_SQLEN = 9 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 1674 S3_NAME_ID3 = 1681 S3_NUM_ID5_ORIG = 1674 S3_NUM_ID3_ORIG = 1681 S3_NAME2_ID5 = 1676 S3_NAME2_ID3 = 1679 S3_NUM2_ID5_ORIG = 1676 S3_NUM2_ID3_ORIG = 1679 S3_SQ2 = GUAC S3_SQLEN2 = 4 S3_SQ = CCGUACCG S3_SQLEN = 8 S3_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 9 H1_INID2 = 3 H1_OUTID2 = 7 H1_INID2_ORIG = 1444 H1_OUTID2_ORIG = 1420 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 55.921524028281084 H1_P_Y = 172.69128047830546 H1_P_Z = 64.25746468710685 # Orientation: H1_DX_X = 0.29100975989136657 H1_DX_Y = 0.9424316805681769 H1_DX_Z = -0.16472961819118837 H1_DY_X = -0.8152969911699657 H1_DY_Y = 0.15419472942164703 H1_DY_Z = -0.5581351105312962 H1_DZ_X = -0.5006037712973921 H1_DZ_Y = 0.2967263265705071 H1_DZ_Z = 0.8132338847359932 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 12 H2_INID2 = 3 H2_OUTID2 = 10 H2_INID2_ORIG = 1676 H2_OUTID2_ORIG = 1451 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 88.425229710056 H2_P_Y = 172.58569118283725 H2_P_Z = 44.97915557069207 # Orientation: H2_DX_X = -0.10592802666137402 H2_DX_Y = -0.7464748078991761 H2_DX_Z = 0.6569281652810517 H2_DY_X = -0.5430955030619771 H2_DY_Y = -0.5099748507865911 H2_DY_Z = -0.6670629101659458 H2_DZ_X = 0.8329625007894919 H2_DZ_Y = -0.42743539013176246 H2_DZ_Z = -0.3513864817283405 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 1416 H3_OUTID2_ORIG = 1679 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 79.83989787608606 H3_P_Y = 168.96604502229636 H3_P_Z = 64.17367901702146 # Orientation: H3_DX_X = -0.6202825383923596 H3_DX_Y = -0.29556020191455445 H3_DX_Z = 0.7265629632797044 H3_DY_X = 0.4506086439710373 H3_DY_Y = -0.8924590605983838 H3_DY_Z = 0.0216489060795908 H3_DZ_X = 0.6420291446220432 H3_DZ_Y = 0.3408239900595049 H3_DZ_Z = 0.6867587533157433 ############# END of Description of junction: j25