#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS1HS2
FINGERPRINT = 161
LOOP_LENGTH_SUM = 3
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  15
S1_NAME_ID3 = 22
S1_NUM_ID5_ORIG =  15
S1_NUM_ID3_ORIG = 22
S1_NAME2_ID5 =  17
S1_NAME2_ID3 = 20
S1_NUM2_ID5_ORIG =  17
S1_NUM2_ID3_ORIG = 20
S1_SQ2 = CUUG
S1_SQLEN2 = 4
S1_SQ = GCCUUGUU
S1_SQLEN = 8
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  4
S2_NAME_ID3 = 10
S2_NUM_ID5_ORIG =  4
S2_NUM_ID3_ORIG = 10
S2_NAME2_ID5 =  6
S2_NAME2_ID3 = 8
S2_NUM2_ID5_ORIG =  6
S2_NUM2_ID3_ORIG = 8
S2_SQ2 = CAG
S2_SQLEN2 = 3
S2_SQ = AGCAGGC
S2_SQLEN = 7
S2_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 7
H1_INID2 = 3
H1_OUTID2 = 5
H1_INID2_ORIG = 17
H1_OUTID2_ORIG = 8
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = -3.4737323499003665
H1_P_Y = 4.138038077472992
H1_P_Z = -12.487875846119973
# Orientation:
H1_DX_X = 0.677313313595235
H1_DX_Y = 0.6463518548182794
H1_DX_Z = 0.35139145550171413
H1_DY_X = 0.7292953839999372
H1_DY_Y = -0.5270235267026191
H1_DY_Z = -0.43631920101952737
H1_DZ_X = -0.09682416074012057
H1_DZ_Y = 0.5517929703021816
H1_DZ_Z = -0.8283414753723655
## Properties of helix 2
H2_INID = 1
H2_OUTID = 8
H2_INID2 = 3
H2_OUTID2 = 6
H2_INID2_ORIG = 6
H2_OUTID2_ORIG = 20
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 0.10725164020125999
H2_P_Y = -0.9228306752863844
H2_P_Z = 10.376658155062952
# Orientation:
H2_DX_X = -0.996647127912996
H2_DX_Y = -0.03427653039030454
H2_DX_Z = -0.0742941578267029
H2_DY_X = 0.054155311009553175
H2_DY_Y = -0.957008611429341
H2_DY_Z = -0.284959154861788
H2_DZ_X = -0.06133273768742975
H2_DZ_Y = -0.28802714648881267
H2_DZ_Z = 0.9556561401326711
#############  END of Description of junction: j1