#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS1HS2
FINGERPRINT = 161
LOOP_LENGTH_SUM = 3
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  5
S1_NAME_ID3 = 11
S1_NUM_ID5_ORIG =  5
S1_NUM_ID3_ORIG = 11
S1_NAME2_ID5 =  7
S1_NAME2_ID3 = 9
S1_NUM2_ID5_ORIG =  7
S1_NUM2_ID3_ORIG = 9
S1_SQ2 = CAC
S1_SQLEN2 = 3
S1_SQ = GUCACAC
S1_SQLEN = 7
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  37
S2_NAME_ID3 = 44
S2_NUM_ID5_ORIG =  37
S2_NUM_ID3_ORIG = 44
S2_NAME2_ID5 =  39
S2_NAME2_ID3 = 42
S2_NUM2_ID5_ORIG =  39
S2_NUM2_ID3_ORIG = 42
S2_SQ2 = GAAG
S2_SQLEN2 = 4
S2_SQ = GUGAAGUC
S2_SQLEN = 8
S2_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 8
H1_INID2 = 3
H1_OUTID2 = 6
H1_INID2_ORIG = 7
H1_OUTID2_ORIG = 42
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = B
# Position:
H1_P_X = -17.856539889330666
H1_P_Y = 13.4356923488186
H1_P_Z = 16.066480308447268
# Orientation:
H1_DX_X = 0.6657561203993332
H1_DX_Y = 0.6420423427839594
H1_DX_Z = -0.38019786719985227
H1_DY_X = -0.2648588546972199
H1_DY_Y = -0.273015298060292
H1_DY_Z = -0.9248310300338787
H1_DZ_X = -0.6975805152377106
H1_DZ_Y = 0.7164106902451515
H1_DZ_Z = -0.011711006069408114
## Properties of helix 2
H2_INID = 1
H2_OUTID = 7
H2_INID2 = 3
H2_OUTID2 = 5
H2_INID2_ORIG = 39
H2_OUTID2_ORIG = 9
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = -1.1431269108993707
H2_P_Y = 0.07378814187619476
H2_P_Z = 12.679057694453741
# Orientation:
H2_DX_X = 0.194044710357533
H2_DX_Y = -0.12338241408703399
H2_DX_Z = 0.9732026665994695
H2_DY_X = -0.5316643598718296
H2_DY_Y = -0.8469540327218905
H2_DY_Z = -0.0013692692231099812
H2_DZ_X = 0.8244268668743998
H2_DZ_Y = -0.5171514733133643
H2_DZ_Z = -0.2299449821706876
#############  END of Description of junction: j1