############# Start of Description of junction: j2 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS2 FINGERPRINT = 157 LOOP_LENGTH_SUM = 3 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 228 S1_NAME_ID3 = 235 S1_NUM_ID5_ORIG = 228 S1_NUM_ID3_ORIG = 235 S1_NAME2_ID5 = 230 S1_NAME2_ID3 = 233 S1_NUM2_ID5_ORIG = 230 S1_NUM2_ID3_ORIG = 233 S1_SQ2 = CAGU S1_SQLEN2 = 4 S1_SQ = AUCAGUAG S1_SQLEN = 8 S1_CHAR = B ## Properties of strand 2 S2_NAME_ID5 = 116 S2_NAME_ID3 = 122 S2_NUM_ID5_ORIG = 116 S2_NUM_ID3_ORIG = 122 S2_NAME2_ID5 = 118 S2_NAME2_ID3 = 120 S2_NUM2_ID5_ORIG = 118 S2_NUM2_ID3_ORIG = 120 S2_SQ2 = AAG S2_SQLEN2 = 3 S2_SQ = CUAAGUU S2_SQLEN = 7 S2_CHAR = B ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 230 H1_OUTID2_ORIG = 120 H1_INSEQ_CHAR = B H1_OUTSEQ_CHAR = B # Position: H1_P_X = 90.81145698057281 H1_P_Y = 63.92668264673121 H1_P_Z = 47.82561196078534 # Orientation: H1_DX_X = -0.2325541380399585 H1_DX_Y = -0.2247608956058471 H1_DX_Z = 0.9462563673164723 H1_DY_X = 0.9708298952217689 H1_DY_Y = 0.0047523475359341205 H1_DY_Z = 0.23972219283283636 H1_DZ_X = -0.058377113873291364 H1_DZ_Y = 0.9744023578580681 H1_DZ_Z = 0.21709941864609306 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 118 H2_OUTID2_ORIG = 233 H2_INSEQ_CHAR = B H2_OUTSEQ_CHAR = B # Position: H2_P_X = 88.07380741153693 H2_P_Y = 43.83401804615844 H2_P_Z = 39.64172707965771 # Orientation: H2_DX_X = -0.8517689704860203 H2_DX_Y = 0.3631187116750283 H2_DX_Z = -0.377669726280331 H2_DY_X = 0.5113835456888438 H2_DY_Y = 0.41948930342116597 H2_DY_Z = -0.7500103956039155 H2_DZ_X = -0.11391439819396965 H2_DZ_Y = -0.8319696662419247 H2_DZ_Z = -0.5430009063872845 ############# END of Description of junction: j2