#############  Start of Description of junction: j41
# Number of strands:
NUM_STRANDS = 3
LILLEY = HS1HS16HS3
FINGERPRINT = 64:135:161
LOOP_LENGTH_SUM = 20
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  2362
S1_NAME_ID3 = 2383
S1_NUM_ID5_ORIG =  2362
S1_NUM_ID3_ORIG = 2383
S1_NAME2_ID5 =  2364
S1_NAME2_ID3 = 2381
S1_NUM2_ID5_ORIG =  2364
S1_NUM2_ID3_ORIG = 2381
S1_SQ2 = AGCAAAAGAUAGCUUGAC
S1_SQLEN2 = 18
S1_SQ = AGAGCAAAAGAUAGCUUGACAG
S1_SQLEN = 22
S1_CHAR = 0
## Properties of strand 2
S2_NAME_ID5 =  2416
S2_NAME_ID3 = 2424
S2_NUM_ID5_ORIG =  2416
S2_NUM_ID3_ORIG = 2424
S2_NAME2_ID5 =  2418
S2_NAME2_ID3 = 2422
S2_NUM2_ID5_ORIG =  2418
S2_NUM2_ID3_ORIG = 2422
S2_SQ2 = GUGGU
S2_SQLEN2 = 5
S2_SQ = GCGUGGUCU
S2_SQLEN = 9
S2_CHAR = 0
## Properties of strand 3
S3_NAME_ID5 =  2405
S3_NAME_ID3 = 2411
S3_NUM_ID5_ORIG =  2405
S3_NUM_ID3_ORIG = 2411
S3_NAME2_ID5 =  2407
S3_NAME2_ID3 = 2409
S3_NUM2_ID5_ORIG =  2407
S3_NUM2_ID3_ORIG = 2409
S3_SQ2 = GAC
S3_SQLEN2 = 3
S3_SQ = CUGACGC
S3_SQLEN = 7
S3_CHAR = 0
## Properties of helix 1
H1_INID = 1
H1_OUTID = 9
H1_INID2 = 3
H1_OUTID2 = 7
H1_INID2_ORIG = 2364
H1_OUTID2_ORIG = 2422
H1_INSEQ_CHAR = 0
H1_OUTSEQ_CHAR = 0
# Position:
H1_P_X = 76.56247402088903
H1_P_Y = 64.32236760883931
H1_P_Z = 90.40719804799716
# Orientation:
H1_DX_X = -0.9612051026313679
H1_DX_Y = -0.05707732825089806
H1_DX_Z = -0.26986464991763626
H1_DY_X = -0.23881470825880058
H1_DY_Y = 0.6617819981103139
H1_DY_Z = 0.7106420492036705
H1_DZ_X = 0.13803001773055712
H1_DZ_Y = 0.7475204114784191
H1_DZ_Z = -0.6497391389076341
## Properties of helix 2
H2_INID = 1
H2_OUTID = 22
H2_INID2 = 3
H2_OUTID2 = 20
H2_INID2_ORIG = 2407
H2_OUTID2_ORIG = 2381
H2_INSEQ_CHAR = 0
H2_OUTSEQ_CHAR = 0
# Position:
H2_P_X = 66.24033062028461
H2_P_Y = 55.76601009591711
H2_P_Z = 70.26750095543082
# Orientation:
H2_DX_X = 0.3595152974799163
H2_DX_Y = 0.4057903292087417
H2_DX_Z = -0.840287426776456
H2_DY_X = -0.802519261963397
H2_DY_Y = -0.3250290940652931
H2_DY_Z = -0.5003188205422759
H2_DZ_X = -0.4761423999767942
H2_DZ_Y = 0.8542191151758161
H2_DZ_Z = 0.2088016240659698
## Properties of helix 3
H3_INID = 1
H3_OUTID = 7
H3_INID2 = 3
H3_OUTID2 = 5
H3_INID2_ORIG = 2418
H3_OUTID2_ORIG = 2409
H3_INSEQ_CHAR = 0
H3_OUTSEQ_CHAR = 0
# Position:
H3_P_X = 72.02560344201859
H3_P_Y = 36.11627745946436
H3_P_Z = 70.49669994212405
# Orientation:
H3_DX_X = 0.8328069249657659
H3_DX_Y = 0.30868619840728684
H3_DX_Z = 0.45950566551667293
H3_DY_X = -0.4531518576268212
H3_DY_Y = -0.09659836263302424
H3_DY_Z = 0.8861840385980742
H3_DZ_X = 0.3179402768735571
H3_DZ_Y = -0.9462460500575318
H3_DZ_Z = 0.05943393889087645
#############  END of Description of junction: j41