############# Start of Description of junction: j43 # Number of strands: NUM_STRANDS = 5 LILLEY = HS7HS8HS8HS9HS11 FINGERPRINT = 20:27:29:44:111:129:132:151:156:171 LOOP_LENGTH_SUM = 43 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2479 S1_NAME_ID3 = 2492 S1_NUM_ID5_ORIG = 2479 S1_NUM_ID3_ORIG = 2492 S1_NAME2_ID5 = 2481 S1_NAME2_ID3 = 2490 S1_NUM2_ID5_ORIG = 2481 S1_NUM2_ID3_ORIG = 2490 S1_SQ2 = GGAUAACAGA S1_SQLEN2 = 10 S1_SQ = AGGGAUAACAGAGU S1_SQLEN = 14 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 2093 S2_NAME_ID3 = 2107 S2_NUM_ID5_ORIG = 2093 S2_NUM_ID3_ORIG = 2107 S2_NAME2_ID5 = 2095 S2_NAME2_ID3 = 2105 S2_NUM2_ID5_ORIG = 2095 S2_NUM2_ID3_ORIG = 2105 S2_SQ2 = AAGCGAAGACC S2_SQLEN2 = 11 S2_SQ = GGAAGCGAAGACCCU S2_SQLEN = 15 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 2529 S3_NAME_ID3 = 2545 S3_NUM_ID5_ORIG = 2529 S3_NUM_ID3_ORIG = 2545 S3_NAME2_ID5 = 2531 S3_NAME2_ID3 = 2543 S3_NUM2_ID5_ORIG = 2531 S3_NUM2_ID3_ORIG = 2543 S3_SQ2 = UACCUCGAUGUCG S3_SQLEN2 = 13 S3_SQ = GCUACCUCGAUGUCGGU S3_SQLEN = 17 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 2613 S4_NAME_ID3 = 2625 S4_NUM_ID5_ORIG = 2613 S4_NUM_ID3_ORIG = 2625 S4_NAME2_ID5 = 2615 S4_NAME2_ID3 = 2623 S4_NUM2_ID5_ORIG = 2615 S4_NUM2_ID3_ORIG = 2623 S4_SQ2 = UGGGUUUAG S4_SQLEN2 = 9 S4_SQ = GCUGGGUUUAGAC S4_SQLEN = 13 S4_CHAR = A ## Properties of strand 5 S5_NAME_ID5 = 2639 S5_NAME_ID3 = 2652 S5_NUM_ID5_ORIG = 2639 S5_NUM_ID3_ORIG = 2652 S5_NAME2_ID5 = 2641 S5_NAME2_ID3 = 2650 S5_NUM2_ID5_ORIG = 2641 S5_NUM2_ID3_ORIG = 2650 S5_SQ2 = CGGCUGCUAU S5_SQLEN2 = 10 S5_SQ = GUCGGCUGCUAUCU S5_SQLEN = 14 S5_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 15 H1_INID2 = 3 H1_OUTID2 = 13 H1_INID2_ORIG = 2481 H1_OUTID2_ORIG = 2105 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 71.34284719771017 H1_P_Y = 113.50117123554412 H1_P_Z = 83.47861370280417 # Orientation: H1_DX_X = -0.3853791460205116 H1_DX_Y = -0.8881273926413087 H1_DX_Z = 0.25042493536521704 H1_DY_X = -0.6709297716800648 H1_DY_Y = 0.08337143699257865 H1_DY_Z = -0.7368191399299633 H1_DZ_X = 0.633510974874028 H1_DZ_Y = -0.45197227562535147 H1_DZ_Z = -0.6280007219583439 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 14 H2_INID2 = 3 H2_OUTID2 = 12 H2_INID2_ORIG = 2531 H2_OUTID2_ORIG = 2490 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 63.8494143672215 H2_P_Y = 108.85461110325274 H2_P_Z = 115.67912870987091 # Orientation: H2_DX_X = -0.5948634816129399 H2_DX_Y = -0.7966141160171816 H2_DX_Z = -0.10744016197628525 H2_DY_X = 0.8007638883658075 H2_DY_Y = -0.5989365670793347 H2_DY_Z = 0.007223828936886889 H2_DZ_X = -0.07010444588334508 H2_DZ_Y = -0.08173700983880394 H2_DZ_Z = 0.9941853086271237 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 17 H3_INID2 = 3 H3_OUTID2 = 15 H3_INID2_ORIG = 2615 H3_OUTID2_ORIG = 2543 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 64.73294883345996 H3_P_Y = 130.95635238005084 H3_P_Z = 114.28787173680341 # Orientation: H3_DX_X = 0.7189292448160245 H3_DX_Y = 0.5388741186950483 H3_DX_Z = 0.43903920684708453 H3_DY_X = -0.448861524999856 H3_DY_Y = 0.8422008411103832 H3_DY_Z = -0.29869896988071787 H3_DZ_X = -0.5307203334366193 H3_DZ_Y = 0.01767561692355457 H3_DZ_Z = 0.8473626733833015 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 13 H4_INID2 = 3 H4_OUTID2 = 11 H4_INID2_ORIG = 2641 H4_OUTID2_ORIG = 2623 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 91.42108190846949 H4_P_Y = 119.97778644746559 H4_P_Z = 94.78464672241623 # Orientation: H4_DX_X = 0.7147056424640255 H4_DX_Y = 0.6950740778409426 H4_DX_Z = -0.07789653999799384 H4_DY_X = 0.3175139550055093 H4_DY_Y = -0.22319730971547358 H4_DY_Z = 0.9216115501188824 H4_DZ_X = 0.6232020001627347 H4_DZ_Y = -0.6834142135259924 H4_DZ_Z = -0.3802160961135286 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 14 H5_INID2 = 3 H5_OUTID2 = 12 H5_INID2_ORIG = 2095 H5_OUTID2_ORIG = 2650 H5_INSEQ_CHAR = A H5_OUTSEQ_CHAR = A # Position: H5_P_X = 48.57600908465972 H5_P_Y = 141.07075513124448 H5_P_Z = 107.93402457689167 # Orientation: H5_DX_X = -0.7446394713619924 H5_DX_Y = -0.6595291875350711 H5_DX_Z = -0.10263190770450592 H5_DY_X = 0.4281729963983807 H5_DY_Y = -0.5899544182497607 H5_DY_Z = 0.6845594711512177 H5_DZ_X = -0.5120350992314684 H5_DZ_Y = 0.4658057912659501 H5_DZ_Z = 0.7216959345722529 ############# END of Description of junction: j43