############# Start of Description of junction: j1 # Number of strands: NUM_STRANDS = 3 LILLEY = 2HS2HS4 FINGERPRINT = 62:128:169 LOOP_LENGTH_SUM = 6 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 64 S1_NAME_ID3 = 73 S1_NUM_ID5_ORIG = 64 S1_NUM_ID3_ORIG = 73 S1_NAME2_ID5 = 66 S1_NAME2_ID3 = 71 S1_NUM2_ID5_ORIG = 66 S1_NUM2_ID3_ORIG = 71 S1_SQ2 = GAUAAG S1_SQLEN2 = 6 S1_SQ = GCGAUAAGCC S1_SQLEN = 10 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 50 S2_NAME_ID3 = 55 S2_NUM_ID5_ORIG = 50 S2_NUM_ID3_ORIG = 55 S2_NAME2_ID5 = 52 S2_NAME2_ID3 = 53 S2_NUM2_ID5_ORIG = 52 S2_NUM2_ID3_ORIG = 53 S2_SQ2 = AC S2_SQLEN2 = 2 S2_SQ = GGACGU S2_SQLEN = 6 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 104 S3_NAME_ID3 = 111 S3_NUM_ID5_ORIG = 104 S3_NUM_ID3_ORIG = 111 S3_NAME2_ID5 = 106 S3_NAME2_ID3 = 109 S3_NUM2_ID5_ORIG = 106 S3_NUM2_ID3_ORIG = 109 S3_SQ2 = AUUU S3_SQLEN2 = 4 S3_SQ = GGAUUUCC S3_SQLEN = 8 S3_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 66 H1_OUTID2_ORIG = 53 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 54.86659849142048 H1_P_Y = 156.17567648961528 H1_P_Z = 42.780393173270774 # Orientation: H1_DX_X = 0.20269448380410182 H1_DX_Y = 0.8302862037995169 H1_DX_Z = -0.5191721930299806 H1_DY_X = -0.7267810929173066 H1_DY_Y = -0.22776724085289857 H1_DY_Z = -0.6480056535032617 H1_DZ_X = -0.6562805720218563 H1_DZ_Y = 0.5086717053015946 H1_DZ_Z = 0.557269151319403 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 10 H2_INID2 = 3 H2_OUTID2 = 8 H2_INID2_ORIG = 106 H2_OUTID2_ORIG = 71 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 47.734579366838155 H2_P_Y = 153.17967632062522 H2_P_Z = 21.13187929032552 # Orientation: H2_DX_X = 0.4307418242509442 H2_DX_Y = 0.7792299147756694 H2_DX_Z = -0.45526060752018793 H2_DY_X = 0.2103962598050657 H2_DY_Y = -0.5772636061881826 H2_DY_Z = -0.7889867824182062 H2_DZ_X = -0.8776074832754119 H2_DZ_Y = 0.24406447690986965 H2_DZ_Z = -0.4125986384002047 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 52 H3_OUTID2_ORIG = 109 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 68.31878565013713 H3_P_Y = 148.92977485395926 H3_P_Z = 31.921426350062045 # Orientation: H3_DX_X = 0.6104911350997924 H3_DX_Y = 0.4253817970573266 H3_DX_Z = 0.6680949787992994 H3_DY_X = -0.11946510147426181 H3_DY_Y = -0.7844222338572138 H3_DY_Z = 0.6086130532285701 H3_DZ_X = 0.7829614699934524 H3_DZ_Y = -0.4513669081387661 H3_DZ_Z = -0.4280645403942458 ############# END of Description of junction: j1