############# Start of Description of junction: j13 # Number of strands: NUM_STRANDS = 7 LILLEY = 2HS2HS3HS3HS2HS2HS6 FINGERPRINT = 30:39:41:42:61:64:65:77:92:101:101:105:118:123:130:131:135:143:143:156:165 LOOP_LENGTH_SUM = 18 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 926 S1_NAME_ID3 = 931 S1_NUM_ID5_ORIG = 926 S1_NUM_ID3_ORIG = 931 S1_NAME2_ID5 = 928 S1_NAME2_ID3 = 929 S1_NUM2_ID5_ORIG = 928 S1_NUM2_ID3_ORIG = 929 S1_SQ2 = GA S1_SQLEN2 = 2 S1_SQ = AUGACC S1_SQLEN = 6 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 910 S2_NAME_ID3 = 917 S2_NUM_ID5_ORIG = 910 S2_NUM_ID3_ORIG = 917 S2_NAME2_ID5 = 912 S2_NAME2_ID3 = 915 S2_NUM2_ID5_ORIG = 912 S2_NUM2_ID3_ORIG = 915 S2_SQ2 = AAAC S2_SQLEN2 = 4 S2_SQ = CGAAACAU S2_SQLEN = 8 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 1039 S3_NAME_ID3 = 1047 S3_NUM_ID5_ORIG = 1039 S3_NUM_ID3_ORIG = 1047 S3_NAME2_ID5 = 1041 S3_NAME2_ID3 = 1045 S3_NUM2_ID5_ORIG = 1041 S3_NUM2_ID3_ORIG = 1045 S3_SQ2 = UUCCG S3_SQLEN2 = 5 S3_SQ = GAUUCCGGU S3_SQLEN = 9 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 1067 S4_NAME_ID3 = 1075 S4_NUM_ID5_ORIG = 1067 S4_NUM_ID3_ORIG = 1075 S4_NAME2_ID5 = 1069 S4_NAME2_ID3 = 1073 S4_NUM2_ID5_ORIG = 1069 S4_NUM2_ID3_ORIG = 1073 S4_SQ2 = CAGGA S4_SQLEN2 = 5 S4_SQ = ACCAGGAGG S4_SQLEN = 9 S4_CHAR = A ## Properties of strand 5 S5_NAME_ID5 = 1084 S5_NAME_ID3 = 1091 S5_NUM_ID5_ORIG = 1084 S5_NUM_ID3_ORIG = 1091 S5_NAME2_ID5 = 1086 S5_NAME2_ID3 = 1089 S5_NUM2_ID5_ORIG = 1086 S5_NUM2_ID3_ORIG = 1089 S5_SQ2 = AGAG S5_SQLEN2 = 4 S5_SQ = CCAGAGAU S5_SQLEN = 8 S5_CHAR = A ## Properties of strand 6 S6_NAME_ID5 = 1265 S6_NAME_ID3 = 1272 S6_NUM_ID5_ORIG = 1265 S6_NUM_ID3_ORIG = 1272 S6_NAME2_ID5 = 1267 S6_NAME2_ID3 = 1270 S6_NUM2_ID5_ORIG = 1267 S6_NUM2_ID3_ORIG = 1270 S6_SQ2 = CCGU S6_SQLEN2 = 4 S6_SQ = GUCCGUAC S6_SQLEN = 8 S6_CHAR = A ## Properties of strand 7 S7_NAME_ID5 = 1284 S7_NAME_ID3 = 1295 S7_NUM_ID5_ORIG = 1284 S7_NUM_ID3_ORIG = 1295 S7_NAME2_ID5 = 1286 S7_NAME2_ID3 = 1293 S7_NUM2_ID5_ORIG = 1286 S7_NUM2_ID3_ORIG = 1293 S7_SQ2 = AAUCGAGU S7_SQLEN2 = 8 S7_SQ = GUAAUCGAGUAG S7_SQLEN = 12 S7_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 928 H1_OUTID2_ORIG = 915 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 58.16382517427056 H1_P_Y = 92.05286039016885 H1_P_Z = 81.34604088596183 # Orientation: H1_DX_X = 0.1314460751406088 H1_DX_Y = -0.9879321774663765 H1_DX_Z = 0.08192644296357798 H1_DY_X = 0.2361039232648352 H1_DY_Y = -0.0490658356144138 H1_DY_Z = -0.9704882694779968 H1_DZ_X = 0.9627963786539127 H1_DZ_Y = 0.14691002859571256 H1_DZ_Z = 0.2268051515043794 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 1041 H2_OUTID2_ORIG = 929 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 41.21945822046148 H2_P_Y = 84.41853979689884 H2_P_Z = 71.18234960504171 # Orientation: H2_DX_X = -0.3997632768332906 H2_DX_Y = 0.4171207084653048 H2_DX_Z = 0.8162105347671655 H2_DY_X = -0.3716717053299661 H2_DY_Y = 0.7402064994767699 H2_DY_Z = -0.5603164120293656 H2_DZ_X = -0.8378839215265046 H2_DZ_Y = -0.5273562863015258 H2_DZ_Z = -0.14087541072038334 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 9 H3_INID2 = 3 H3_OUTID2 = 7 H3_INID2_ORIG = 1069 H3_OUTID2_ORIG = 1045 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 47.65144377777733 H3_P_Y = 90.21836471065406 H3_P_Z = 98.32357216833844 # Orientation: H3_DX_X = -0.21747477307157226 H3_DX_Y = 0.9142400817876677 H3_DX_Z = 0.3418622470094448 H3_DY_X = -0.7593933857160735 H3_DY_Y = -0.3785213412948423 H3_DY_Z = 0.5291911563084 H3_DZ_X = 0.6132099223007899 H3_DZ_Y = -0.14452220257535942 H3_DZ_Z = 0.7765867138669194 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 9 H4_INID2 = 3 H4_OUTID2 = 7 H4_INID2_ORIG = 1086 H4_OUTID2_ORIG = 1073 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 33.14448919560281 H4_P_Y = 102.68879131685895 H4_P_Z = 104.53789643370972 # Orientation: H4_DX_X = -0.9818195406198456 H4_DX_Y = 0.17970451919661912 H4_DX_Z = 0.06112835215625978 H4_DY_X = -0.06468163733897825 H4_DY_Y = -0.6195049350728681 H4_DY_Z = 0.7823234121586182 H4_DZ_X = 0.17845636847189894 H4_DZ_Y = 0.7641465312364204 H4_DZ_Z = 0.6198656333038315 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 8 H5_INID2 = 3 H5_OUTID2 = 6 H5_INID2_ORIG = 1267 H5_OUTID2_ORIG = 1089 H5_INSEQ_CHAR = A H5_OUTSEQ_CHAR = A # Position: H5_P_X = 12.495292910523691 H5_P_Y = 97.89978915131826 H5_P_Z = 94.30310029638737 # Orientation: H5_DX_X = -0.13825490100844462 H5_DX_Y = 0.9357077491827397 H5_DX_Z = -0.32455598972521216 H5_DY_X = -0.9741572453578282 H5_DY_Y = -0.06937863558283652 H5_DY_Z = 0.21495177654887243 H5_DZ_X = 0.17861479128001 H5_DZ_Y = 0.345886705503446 H5_DZ_Z = 0.9211184197984323 ## Properties of helix 6 H6_INID = 1 H6_OUTID = 8 H6_INID2 = 3 H6_OUTID2 = 6 H6_INID2_ORIG = 1286 H6_OUTID2_ORIG = 1270 H6_INSEQ_CHAR = A H6_OUTSEQ_CHAR = A # Position: H6_P_X = 10.455290330415508 H6_P_Y = 90.76027031798805 H6_P_Z = 72.95554537687968 # Orientation: H6_DX_X = 0.7048477929405816 H6_DX_Y = -0.6648566633871127 H6_DX_Z = 0.24729578632994276 H6_DY_X = -0.7059891443313688 H6_DY_Y = -0.691429579836381 H6_DY_Z = 0.15331165713523376 H6_DZ_X = 0.069057344816148 H6_DZ_Y = -0.2826495237516582 H6_DZ_Z = -0.9567342002091834 ## Properties of helix 7 H7_INID = 1 H7_OUTID = 12 H7_INID2 = 3 H7_OUTID2 = 10 H7_INID2_ORIG = 912 H7_OUTID2_ORIG = 1293 H7_INSEQ_CHAR = A H7_OUTSEQ_CHAR = A # Position: H7_P_X = 31.1474016753004 H7_P_Y = 100.4618655409203 H7_P_Z = 77.99984153545502 # Orientation: H7_DX_X = 0.9640511427445091 H7_DX_Y = -0.21564809381038685 H7_DX_Z = -0.15524591398472865 H7_DY_X = -0.259996865349283 H7_DY_Y = -0.8861273632210356 H7_DY_Z = -0.38364036044121974 H7_DZ_X = -0.05483633997225468 H7_DZ_Y = 0.4102123788805869 H7_DZ_Z = -0.9103399255396738 ############# END of Description of junction: j13