############# Start of Description of junction: j1 # Number of strands: NUM_STRANDS = 3 LILLEY = 2HS2HS4 FINGERPRINT = 62:127:170 LOOP_LENGTH_SUM = 6 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 64 S1_NAME_ID3 = 73 S1_NUM_ID5_ORIG = 64 S1_NUM_ID3_ORIG = 73 S1_NAME2_ID5 = 66 S1_NAME2_ID3 = 71 S1_NUM2_ID5_ORIG = 66 S1_NUM2_ID3_ORIG = 71 S1_SQ2 = GAUAAG S1_SQLEN2 = 6 S1_SQ = GCGAUAAGCC S1_SQLEN = 10 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 50 S2_NAME_ID3 = 55 S2_NUM_ID5_ORIG = 50 S2_NUM_ID3_ORIG = 55 S2_NAME2_ID5 = 52 S2_NAME2_ID3 = 53 S2_NUM2_ID5_ORIG = 52 S2_NUM2_ID3_ORIG = 53 S2_SQ2 = AC S2_SQLEN2 = 2 S2_SQ = GGACGU S2_SQLEN = 6 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 104 S3_NAME_ID3 = 111 S3_NUM_ID5_ORIG = 104 S3_NUM_ID3_ORIG = 111 S3_NAME2_ID5 = 106 S3_NAME2_ID3 = 109 S3_NUM2_ID5_ORIG = 106 S3_NUM2_ID3_ORIG = 109 S3_SQ2 = AUUU S3_SQLEN2 = 4 S3_SQ = GGAUUUCC S3_SQLEN = 8 S3_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 66 H1_OUTID2_ORIG = 53 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 54.878460809492736 H1_P_Y = 156.4426521085351 H1_P_Z = 42.713225974040306 # Orientation: H1_DX_X = 0.19049069986338196 H1_DX_Y = 0.8327276541333504 H1_DX_Z = -0.5198826283952016 H1_DY_X = -0.7329936730322899 H1_DY_Y = -0.23162557067900025 H1_DY_Z = -0.6395857020777385 H1_DZ_X = -0.6530188117965707 H1_DZ_Y = 0.5029058053444828 H1_DZ_Z = 0.5662615847738692 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 10 H2_INID2 = 3 H2_OUTID2 = 8 H2_INID2_ORIG = 106 H2_OUTID2_ORIG = 71 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 47.74167761782604 H2_P_Y = 153.41249403744064 H2_P_Z = 20.863367971514162 # Orientation: H2_DX_X = 0.4330992452118636 H2_DX_Y = 0.7682123408033874 H2_DX_Z = -0.4714603304991094 H2_DY_X = 0.20028411652131695 H2_DY_Y = -0.5920080581701939 H2_DY_Z = -0.7806489170752826 H2_DZ_X = -0.8788124466950791 H2_DZ_Y = 0.24367244099190088 H2_DZ_Z = -0.41025897313142323 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 52 H3_OUTID2_ORIG = 109 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 68.12173058868439 H3_P_Y = 149.2484117737734 H3_P_Z = 31.807818445615464 # Orientation: H3_DX_X = 0.6319458476384341 H3_DX_Y = 0.423921905735682 H3_DX_Z = 0.6487947776377077 H3_DY_X = -0.09580313107417737 H3_DY_Y = -0.7879908322731239 H3_DY_Z = 0.6081876423686232 H3_DZ_X = 0.7690684012029863 H3_DZ_Y = -0.44649822630213976 H3_DZ_Z = -0.45735448853174887 ############# END of Description of junction: j1